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@Genentech

Genentech

Dedicated to pursuing groundbreaking science to discover and develop medicines

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  1. BRAID BRAID Public

    BRAID is a department within Genentech dedicated to advancing biological and clinical sciences through artificial intelligence.

    201 9

  2. equifold equifold Public

    Official code repository for EquiFold: Protein Structure Prediction with a Novel Coarse-Grained Structure Representation

    Python 121 18

  3. scimilarity scimilarity Public

    A unifying representation of single cell expression profiles that quantifies similarity between expression states and generalizes to represent new studies without additional training.

    Python 200 12

  4. polygraph polygraph Public

    Polygraph evaluates and compares groups of nucleic acid sequences based on their sequence and functional content for effective design of regulatory elements.

    Jupyter Notebook 32

  5. gReLU gReLU Public

    gReLU is a python library to train, interpret, and apply deep learning models to DNA sequences.

    Python 267 39

  6. gneprop gneprop Public

    GNEprop is a graph neural network-based model to predict antibacterial activity from molecular structures in virtual screening settings.

    Python 4

Repositories

Showing 10 of 121 repositories
  • decima Public

    Decima is a Python library to train sequence models on single-cell RNA-seq data.

    Genentech/decima’s past year of commit activity
    Jupyter Notebook 40 8 5 1 Updated Jul 9, 2025
  • checked Public

    batch R CMD check management

    Genentech/checked’s past year of commit activity
    R 8 1 12 0 Updated Jul 9, 2025
  • jmpost Public
    Genentech/jmpost’s past year of commit activity
    R 17 4 54 (1 issue needs help) 1 Updated Jul 9, 2025
  • spex-tools Public
    Genentech/spex-tools’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jul 9, 2025
  • nfnull Public
    Genentech/nfnull’s past year of commit activity
    Jupyter Notebook 1 MIT 0 0 0 Updated Jul 8, 2025
  • gReLU Public

    gReLU is a python library to train, interpret, and apply deep learning models to DNA sequences.

    Genentech/gReLU’s past year of commit activity
    Python 267 MIT 39 22 5 Updated Jul 8, 2025
  • BayesERtools Public
    Genentech/BayesERtools’s past year of commit activity
    R 6 1 4 0 Updated Jul 7, 2025
  • SIGnature Public

    SIGnature is a Python package that empowers researchers to rapidly query gene sets across diverse single-cell RNA sequencing (scRNA-seq) datasets through precomputed gene attribution scores.

    Genentech/SIGnature’s past year of commit activity
    Python 2 0 0 0 Updated Jul 4, 2025
  • phase1b Public
    Genentech/phase1b’s past year of commit activity
    R 9 4 15 0 Updated Jun 27, 2025
  • BRAID Public

    BRAID is a department within Genentech dedicated to advancing biological and clinical sciences through artificial intelligence.

    Genentech/BRAID’s past year of commit activity
    201 9 0 0 Updated Jun 26, 2025

People

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