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Naturalis Biodiversity Center

25 followers
Leiden, the Netherlands
https://www.naturalis.nl

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barcode-constrained-phylogeny barcode-constrained-phylogeny Public

Pipeline for building topologically-constrained phylogenies from DNA barcode data

Python 2 3

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Showing 10 of 183 repositories

sdmdl Public
Species Distribution Modelling using Deep Learning

naturalis/sdmdl’s past year of commit activity

Python 25 MIT 11 4 21 Updated Jun 22, 2025
galaxy-tool-edentity-metabarcoding-pipeline Public

naturalis/galaxy-tool-edentity-metabarcoding-pipeline’s past year of commit activity

Python 0 Apache-2.0 0 0 0 Updated Jun 19, 2025
barcode_validator Public
Standardized validation of barcodes

naturalis/barcode_validator’s past year of commit activity

Python 1 Apache-2.0 5 4 0 Updated Jun 12, 2025
galaxy-tool-beast2 Public Forked from millerjeremya/galaxy-beast2
Beast2 respository for the Galaxy tool shed

naturalis/galaxy-tool-beast2’s past year of commit activity

0 2 0 0 Updated Jun 6, 2025
mebioda Public
Course repository for Methods in Biodiversity Analysis

naturalis/mebioda’s past year of commit activity

HTML 22 MIT 83 7 0 Updated Jun 6, 2025
galaxy-tool-structural-validator Public
Galaxy tool for structural validation of DNA barcode data

naturalis/galaxy-tool-structural-validator’s past year of commit activity

0 Apache-2.0 0 2 0 Updated May 15, 2025
bioconda-recipes Public Forked from bioconda/bioconda-recipes
Conda recipes for the bioconda channel.

naturalis/bioconda-recipes’s past year of commit activity

Shell 0 MIT 3,540 0 0 Updated May 14, 2025
galaxy-tool-BLAST Public
A new tool and wrapper for the identification with blastn

naturalis/galaxy-tool-BLAST’s past year of commit activity

Python 0 2 2 0 Updated Apr 29, 2025
BGE_data_processing_skimming Public
BGE sample download, checksum, sample-range, plate-split; prep for MGE

naturalis/BGE_data_processing_skimming’s past year of commit activity

Shell 0 GPL-3.0 0 0 0 Updated Apr 3, 2025
barcode-constrained-phylogeny-backbone Public

naturalis/barcode-constrained-phylogeny-backbone’s past year of commit activity

Python 0 Apache-2.0 0 0 0 Updated Mar 24, 2025

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