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Mazurowski Lab

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  1. finetune-SAM finetune-SAM Public

    This is an official repo for fine-tuning SAM to customized medical images.

    Python 220 35

  2. segmentation-guided-diffusion segmentation-guided-diffusion Public

    [MICCAI 2024] Easy diffusion models (optionally with segmentation guidance) for medical images and beyond.

    Python 175 13

  3. segment-anything-medical-evaluation segment-anything-medical-evaluation Public

    Code for "Segment Anything Model for Medical Image Analysis: an Experimental Study" in Medical Image Analysis

    Python 162 18

  4. SegmentAnyBone SegmentAnyBone Public

    SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRI

    Python 93 19

  5. SlicerSegmentWithSAM SlicerSegmentWithSAM Public

    3D Slicer extension for Segment Anything Model (SAM) developed by Meta

    Python 63 7

  6. duke-dbt-data duke-dbt-data Public

    Jupyter Notebook 38 17

Repositories

Showing 10 of 33 repositories
  • segmentation-guided-diffusion Public

    [MICCAI 2024] Easy diffusion models (optionally with segmentation guidance) for medical images and beyond.

    Python 175 13 6 0 Updated Jun 18, 2025
  • Python 13 1 0 0 Updated Jun 15, 2025
  • Python 18 2 0 0 Updated Jun 7, 2025
  • SlicerSegmentWithSAM Public

    3D Slicer extension for Segment Anything Model (SAM) developed by Meta

    Python 63 Apache-2.0 7 7 1 Updated Jun 2, 2025
  • SlicerSegmentHumanBody Public

    3D Slicer extension for SegmentAnyBone developed by Mazurowski Lab

    Python 5 3 0 0 Updated Jun 2, 2025
  • ContourDiff Public

    Contour-Guided Diffusion Models for Unpaired Image-to-Image Translation

    Python 33 Apache-2.0 4 0 0 Updated May 30, 2025
  • medical-image-similarity-metrics Public

    An evaluation framework for image generation metrics.

    Jupyter Notebook 3 0 0 0 Updated May 23, 2025
  • RaD Public

    RaD: a metric for comparing medical image distributions.

    Python 4 Apache-2.0 0 0 0 Updated May 13, 2025
  • SLM-SAM2 Public

    This is the official implementation of SLM-SAM 2

    Python 7 GPL-3.0 0 0 0 Updated May 6, 2025
  • intrinsic-properties Public

    [ICLR 2024] Easy tools for measuring the label sharpness and intrinsic dimension of datasets and learned representations, which relate to model generalization and robustness.

    Python 14 Apache-2.0 3 0 0 Updated Mar 12, 2025