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Breedbase and Solgenomics

Comprehensive open source genomics and breeding software

38 followers
Ithaca, NY
https://breedbase.org

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sgn sgn Public

The code behind the Sol Genomics Network, Cassavabase and other Breedbase websites

PLpgSQL 67 36

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All C C++ CSS Dockerfile Emacs Lisp HTML Java JavaScript Mustache Perl PLpgSQL Python R Shell TSQL

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Showing 10 of 178 repositories

breedbase_dockerfile Public
The Dockerfiles for breeDBase

solgenomics/breedbase_dockerfile’s past year of commit activity

Dockerfile 9 MIT 8 0 0 Updated Jun 19, 2025
sgn Public
The code behind the Sol Genomics Network, Cassavabase and other Breedbase websites

solgenomics/sgn’s past year of commit activity

PLpgSQL 67 MIT 36 518 5 Updated Jun 19, 2025
cea Public
Cassava Expression Atlas

solgenomics/cea’s past year of commit activity

0 1 1 0 Updated Jun 18, 2025
Tea Public
code and database for the expression query, mining, analysis, and visualization tools

solgenomics/Tea’s past year of commit activity

HTML 8 MIT 5 19 0 Updated Jun 18, 2025
cassbase Public
The mason components for the cassbase database, a variation of cassavabase for the CASS project

solgenomics/cassbase’s past year of commit activity

Perl 0 MIT 0 1 1 Updated Jun 17, 2025
taro.breedbase.org Public
A breedbase site for taro

solgenomics/taro.breedbase.org’s past year of commit activity

PLpgSQL 0 MIT 0 0 0 Updated Jun 16, 2025
gtsimsrch Public Forked from tomfy/gtsimsrch

solgenomics/gtsimsrch’s past year of commit activity

Perl 0 1 0 0 Updated Jun 11, 2025
R_libs Public
Compiled R dependencies for Solgenomics & Breedbase databases, for faster install of docker etc.

solgenomics/R_libs’s past year of commit activity

C++ 0 MIT 0 0 7 Updated Jun 4, 2025
perl-local-lib Public
Git repository for Perl local-lib for faster installs (eg. Dockerfiles)

solgenomics/perl-local-lib’s past year of commit activity

Perl 0 1 0 1 Updated Jun 4, 2025
gbsappui Public
A user interface for GBSapp that can be integrated into Breedbase

solgenomics/gbsappui’s past year of commit activity

Perl 0 MIT 0 7 0 Updated May 29, 2025

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