CobiontID
Tools for detecting cobionts and contaminants in Darwin Tree of Life genomes
- 12 followers
- United Kingdom
Pinned Loading
Repositories
Showing 9 of 9 repositories
- read_VAE Public
VAE-based framework to explore long-read datasets and identify potential contaminants or cobionts
CobiontID/read_VAE’s past year of commit activity - WolbachiaSubmission Public
CobiontID/WolbachiaSubmission’s past year of commit activity - MarkerScan Public
This repository contains a Snakemake pipeline which determines the species composition of the sample by SSU presence and separates them accordingly.
CobiontID/MarkerScan’s past year of commit activity - Kudoa_genomes Public
Data associated with "Kudoa genomes from contaminated hosts reveal extensive gene order conservation and rapid sequence evolution"
CobiontID/Kudoa_genomes’s past year of commit activity - HiC_network Public
Group and visualise networks of interacting sequences using chromatin contacts and graph embeddings
CobiontID/HiC_network’s past year of commit activity - CobiontID.github.io Public
CobiontID/CobiontID.github.io’s past year of commit activity - fastk-medians Public Forked from thegenemyers/FASTK
Calculate median number of times each k-mer in a sequence occurs across a set
CobiontID/fastk-medians’s past year of commit activity
Top languages
Loading…
Most used topics
Loading…