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@Eden-Kramer-Lab

Eden-Kramer Lab

Tools for analysis of neural data

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  1. GLM-CFC Public

    Forked from jessicanada/GLM-CFC

    A GLM based approach to measure CFC

    MATLAB 16 7

  2. dppm Public

    Forked from Mark-Kramer/dppm

    Matlab pipeline for simulating dynamical networks and evaluating dynamic community tracking methods, including CPM, MMM and DPPM

    MATLAB 14 1

  3. spline-granger-causality Public

    A procedure to reduce the parameters estimate in Granger-causal analysis through temporal smoothing.

    MATLAB 5 6

  4. spectral_connectivity Public

    Frequency domain estimation and functional and directed connectivity analysis tools for electrophysiological data

    Python 127 45

  5. replay_trajectory_classification Public

    State space models for decoding hippocampal trajectories and determining their type using sorted or clusterless data

    Jupyter Notebook 48 16

  6. SSPE-paper Public

    Forked from wodeyara/SSPE-paper

    Code repository to recreate the simulations and plots of the State Space model for Real Time Phase Estimation paper as well as code for the state space model in SSPE

    MATLAB 4 1

Repositories

Showing 10 of 40 repositories
  • ripple_detection Public

    Tools for identifying sharp wave ripple events using LFPs

    Python 36 MIT 10 0 0 Updated Oct 16, 2024
  • replay_trajectory_classification Public

    State space models for decoding hippocampal trajectories and determining their type using sorted or clusterless data

    Jupyter Notebook 48 MIT 16 13 0 Updated Sep 21, 2024
  • Switching_Oscillator_Networks Public Forked from Stephen-Lab-BU/Switching_Oscillator_Networks
    MATLAB 0 2 0 0 Updated May 9, 2024
  • spectral_connectivity Public

    Frequency domain estimation and functional and directed connectivity analysis tools for electrophysiological data

    Python 127 GPL-3.0 45 8 1 Updated Nov 2, 2023
  • loren_frank_data_processing Public

    Python tools for reading in data from Loren Frank's lab

    Jupyter Notebook 9 GPL-3.0 1 1 0 Updated Aug 16, 2023
  • Common_Oscillator_Models Public Forked from whsin/Common_Oscillator_Models

    Code repository of implementing the Common Oscillator Model

    MATLAB 2 3 0 0 Updated Jun 2, 2023
  • UncertaintyInPhase Public Forked from wodeyara/UncertaintyInPhase

    Repository to run analyses described in paper: "Different methods to estimate the phase of neural rhythms agree, but only during times of low uncertainty "

    MATLAB 3 GPL-3.0 2 0 0 Updated Jan 7, 2023
  • regularized_glm Public

    Tools for fitting a generalized linear model with a L2 or difference penalty

    Python 1 MIT 1 2 0 Updated Dec 13, 2022
  • replay_identification Public

    A semi-latent state-space model that combines movement, LFP, and ensemble spiking information to identify periods of replay and decode its content in real time. Long Tao et al., unpublished.

    Python 5 MIT 3 5 0 Updated Oct 29, 2022
  • Apnea_dynamics_toolbox Public Forked from preraulab/Apnea_dynamics_toolbox

    The sleep apnea dynamics toolbox implemented in Matlab

    MATLAB 0 4 0 0 Updated Aug 22, 2022
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