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ATACseq-Snakemake
ATACseq-Snakemake PublicForked from porchard/ATACseq-Snakemake
Standard Parker Lab ATAC-seq processing pipeline in Snakemake form
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- PanKbase-scRNA-seq Public Forked from hhvu0102/PanKbase-scRNA-seq
Collection of code and documentation to replicate islet single cell map on PanKbase.
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- PanKgraph-finemap-coloc Public Forked from hhvu0102/PanKgraph-finemap-coloc
Collection of code and documentation to conduct fine-mapping and colocalization analysis for PanKbase and PanKgraph.
- albanus_2020_nih_islets_sn_t1d Public
snATAC-seq + scRNA-seq analyses of healthy and AAB+ human islets
- PanKbase-DEG-analysis Public Forked from hhvu0102/PanKbase-DEG-analysis
Collection of code and documentation to replicate islet DEG analysis on PanKbase.
- snakemake-multiome-preprocessing Public Forked from ccrobertson/snakemake-multiome-preprocessing
Automates setup of configs and execution of preprocessing steps for a multiome library.
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