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@hms-dbmi

Harvard Medical School - Department of Biomedical Informatics

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  1. UpSetR Public

    An R implementation of the UpSet set visualization technique published by Lex, Gehlenborg, et al..

    R 787 159

  2. scde Public

    R package for analyzing single-cell RNA-seq data

    R 174 66

  3. viv Public

    Library for multiscale visualization of high-resolution multiplexed bioimaging data on the web. Directly renders Zarr and OME-TIFF.

    JavaScript 303 49

Repositories

Showing 10 of 374 repositories
  • i2b2v2-webclient Public
    JavaScript 2 4 1 0 Updated Apr 11, 2025
  • udi-dataset-review Public Forked from hms-dbmi/udi-grammar

    For reviewing the generated datasets.

    Vue 0 MIT 1 0 1 Updated Apr 11, 2025
  • GIC-ontology Public
    1 Apache-2.0 3 1 1 Updated Apr 11, 2025
  • PIC-SURE-Migrations Public

    Database migrations for the PIC-SURE All-in-One.

    0 Apache-2.0 0 0 0 Updated Apr 11, 2025
  • vizarr Public

    A minimal Zarr image viewer based on Viv.

    TypeScript 145 MIT 22 20 (1 issue needs help) 11 Updated Apr 11, 2025
  • udi-grammar Public

    The Universal Discovery Interface Grammar.

    TypeScript 2 MIT 1 0 5 Updated Apr 11, 2025
  • pic-sure-gic-common-release-control Public
    0 1 0 0 Updated Apr 11, 2025
  • viv Public

    Library for multiscale visualization of high-resolution multiplexed bioimaging data on the web. Directly renders Zarr and OME-TIFF.

    JavaScript 303 MIT 49 50 (1 issue needs help) 10 Updated Apr 11, 2025
  • pic-sure-all-in-one Public
    Shell 4 Apache-2.0 12 0 2 Updated Apr 11, 2025
  • chromoscope Public

    Interactive multiscale visualization for structural variation in human genomes

    TypeScript 68 MIT 7 35 2 Updated Apr 10, 2025
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