Single-cell RNAseq materials derived from the 2023 ISMB OSCA workshop in the carpentries workbench format.

A `DataFrame` (`S4Vectors`) backend for `dplyr`

Collection of great (and free) machine learning books

WhatTheDuck is an open-source web application built on DuckDB. It allows users to upload CSV files, store them in tables, and perform SQL queries on the data.

The R Encoding FAQ

Unified graphics device

Asynchronous http server graphics device for R.

Disk Usage/Free Utility - a better 'df' alternative

Modern problems require modern solutions.

Render markdown on the CLI, with pizzazz! 💅🏻

Orchestrating Hi-C analysis with Bioconductor

Quarto extension for calculating accurate word counts

Read RDS files, in Python

Destructuring assignments in R with the `.` object.

An emacs mode for quarto: https://quarto.org

simple interface to collectl output

📝 A nicely formatted LaTeX preprint template

Serve side code for Bioconductor Hubs

Proteomics search & quantification so fast that it feels like magic

High-performance sparse data representation and manipulation in R

A repository for default Renku project templates.

Align proteins to genomes with splicing and frameshift

Custom landing page for iSEE and the Bioconductor ExperimentHub

Cell type pipes for R

🧮 A collection of resources to learn mathematics for machine learning

Create artistic visualisations with your exercise data

Yet Another Dotfiles Manager