Skip to content
@3dem

3dem

Pinned Loading

  1. relion Public

    Image-processing software for cryo-electron microscopy

    C++ 467 206

  2. relion-documents Public

    Documentations for RELION

    TeX 13 9

  3. model-angelo Public

    Automatic atomic model building program for cryo-EM maps

    Python 135 22

  4. DynaMight Public

    Tool for reconstruction and analysis of continuous heterogeneity of a cryo-EM dataset

    Python 25 7

  5. topaz Public

    Forked from tbepler/topaz

    Pipeline for particle picking in cryo-electron microscopy images using convolutional neural networks trained from positive and unlabeled examples. Also featuring micrograph and tomogram denoising w…

    Jupyter Notebook 7 2

  6. relion-blush Public

    Blush refinement - For use in RELION-5

    Python 5 2

Repositories

Showing 10 of 17 repositories
  • relion Public

    Image-processing software for cryo-electron microscopy

    C++ 467 GPL-2.0 206 212 (5 issues need help) 6 Updated Mar 22, 2025
  • emhub Public

    Web application for monitor EM results

    Python 12 GPL-3.0 4 10 2 Updated Mar 18, 2025
  • emtools Public

    Basic utilities for CryoEM data manipulation

    Python 5 GPL-3.0 1 1 0 Updated Mar 18, 2025
  • model-angelo Public

    Automatic atomic model building program for cryo-EM maps

    Python 135 MIT 22 40 1 Updated Feb 28, 2025
  • relion-documents Public

    Documentations for RELION

    TeX 13 GPL-3.0 9 3 1 Updated Jan 23, 2025
  • relion-classranker Public

    RELION automatic 2D class selection

    Python 6 GPL-3.0 2 1 0 Updated Jan 9, 2025
  • DynaMight Public

    Tool for reconstruction and analysis of continuous heterogeneity of a cryo-EM dataset

    Python 25 7 10 2 Updated Dec 19, 2024
  • qscore Public

    Q-score in pure Python without requiring Chimera

    Python 1 MIT 1 0 0 Updated Sep 6, 2024
  • em-testdata Public

    EM related files (metadata, image, etc) used for running basic tests

    Starlark 2 1 0 0 Updated Jun 24, 2024
  • relion-blush Public

    Blush refinement - For use in RELION-5

    Python 5 MIT 2 0 0 Updated May 29, 2024