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flywheel-apps

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  1. matlab-mcr matlab-mcr Public archive

    Matlab Compiler Runtime

    Dockerfile 6 4

  2. SlicerFlywheelConnect SlicerFlywheelConnect Public archive

    A 3D Slicer Extension to view data from the flywheel heirarchy

    Python 4 3

  3. mri-deface mri-deface Public

    This gear uses the mri_deface tool from Free Surfer to deface an MRI image.

    Shell 3

  4. openslide-to-png openslide-to-png Public

    Python 3

  5. fsl-topup fsl-topup Public

    Flywheel Gear to execute TopUp from FSL

    Python 3 3

  6. freesurfer-recon-all freesurfer-recon-all Public

    Gear that runs FreeSurfer v7.2.0 Release (July 19, 2021)

    Shell 3 2

Repositories

Showing 10 of 110 repositories
  • mriqc Public archive

    No-reference image quality metrics for quality assessment of MRI

    Shell 1 4 0 0 Updated Jul 9, 2024
  • fsl-feat Public

    FEAT is a software tool for high quality model-based FMRI data analysis

    Dockerfile 0 3 0 0 Updated May 1, 2024
  • fsl-anat Public

    A Flywheel gear for running FSL's Processing Script: fsl_anat

    Python 0 1 0 0 Updated Apr 29, 2024
  • fsl-base Public

    Build contexts for base images containing various FSL versions

    Python 0 0 0 0 Updated Apr 25, 2024
  • fsl-SuperBET2 Public archive

    Modified Brain Extraction Tool 2 (BET2) from FMRIB Software Library (FSL) v5.0 called SuperBET2 deletes non-brain tissue from an image of the whole head. It can also estimate the inner and outer skull surfaces, and outer scalp surface, if you have good quality T1.

    Shell 0 Apache-2.0 0 0 0 Updated Apr 23, 2024
  • matlab-mcr Public archive

    Matlab Compiler Runtime

    Dockerfile 6 4 0 0 Updated Apr 18, 2024
  • bids-fmriprep Public archive

    This repository is archived. Please visit the new repository for updated versions of this gear (URL below).

    Python 2 BSD-3-Clause 5 2 5 Updated Apr 10, 2024
  • fsl-siena-sienax Public
    Shell 0 0 0 0 Updated Mar 19, 2024
  • nobrainer-gear Public

    This gear wraps nobrainer for prediction on 3D imaging

    Python 0 Apache-2.0 0 0 0 Updated Mar 19, 2024
  • extract-cmrr-physio Public

    Extract physiological log files from encoded "_PHYSIO" DICOM file generated by CMRR MB sequences (>=R015, >=VD13A)

    Python 0 0 2 0 Updated Mar 15, 2024
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flywheel gear-builder