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<code>sc.external.pp.magic</code>: what is <code>n_jobs</code>'s default _really_?

Status: Open.

#2387 In scverse/scanpy;

· alexlenail opened on Dec 27, 2022

Scanpy’s tests should prevent DeprecationWarnings and FutureWarnings

Development Process 🚀

Status: Open.

Enhancement

#3558 In scverse/scanpy;

· flying-sheep opened on Apr 4, 2025

_sparse_nanmean is inefficient

Area – Performance 🐌

good first issueeasy first issue to get started in OSS community contribution!easy first issue to get started in OSS community contribution!

Status: Open.

Enhancement

#1894 In scverse/scanpy;

· ivirshup opened on Jun 22, 2021

Refactored scanpy.tools._sparse_nanmean to eliminate unnecessary data…

benchmark

Status: Open (in progress).

scverse/scanpynumber 3570

#3570 In scverse/scanpy;

· Reovirus opened on Apr 8, 2025

Refactor <code>BasePlot</code> not to create a dataframe representation of the data

Area - Plotting 🌺

Area – Performance 🐌

good first issueeasy first issue to get started in OSS community contribution!easy first issue to get started in OSS community contribution!

Status: Open.

Enhancement

#3718 In scverse/scanpy;

· ilan-gold opened on Jul 18, 2025