fusion-symlink.nf

#!/usr/bin/env nextflow
/*
 * Copyright 2013-2024, Seqera Labs
 *
 * Licensed under the Apache License, Version 2.0 (the "License");
 * you may not use this file except in compliance with the License.
 * You may obtain a copy of the License at
 *
 *     http://www.apache.org/licenses/LICENSE-2.0
 *
 * Unless required by applicable law or agreed to in writing, software
 * distributed under the License is distributed on an "AS IS" BASIS,
 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 * See the License for the specific language governing permissions and
 * limitations under the License.
 */

params.outdir = 'results'

process CREATE {

    output:
    path "data.txt"

    script:
    """
    echo HELLO > data.txt
    """
}

process FORWARD {

    input:
    path "data.txt"

    output:
    path "data.txt"

    script:
    """
    echo AND
    """
}

process PUBLISH {
    publishDir params.outdir

    input:
    path "data.txt"

    output:
    path "data.txt"

    script:
    """
    echo BYE
    """
}

workflow {
    CREATE | FORWARD | PUBLISH
}