template-simple.nf

#!/usr/bin/env nextflow
/*
 * Copyright 2013-2024, Seqera Labs
 *
 * Licensed under the Apache License, Version 2.0 (the "License");
 * you may not use this file except in compliance with the License.
 * You may obtain a copy of the License at
 *
 *     http://www.apache.org/licenses/LICENSE-2.0
 *
 * Unless required by applicable law or agreed to in writing, software
 * distributed under the License is distributed on an "AS IS" BASIS,
 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 * See the License for the specific language governing permissions and
 * limitations under the License.
 */

workflow {
  channel.of( 'PF00389', 'PF03061', 'PF02826') | foo | view { it.text }
}

process foo {
  input:
    val family
  output:
    file 'file.out'

  script:
  template 'bash-script.txt'
}