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README.md

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GeneLab pipeline for generating reference annotation tables

The document GL-DPPD-7110.md holds an overview and example commands for how GeneLab generates reference annotation tables. See the Repository Links descriptions below for more information.

Repository Links

  • Pipeline_GL-DPPD-7110_Versions

    • Contains the current and previous GeneLab reference annotation table pipeline versions documentation
      • Links to GeneLab reference annotation tables for each model organism is provided in the genelab_annots_link column of the *_annotations.csv file within each pipeline version sub-directory. The respective link in the genelab_annots_info_link column of the *_annotations.csv file holds the exact processing script, build info, and date the reference annotation table for each model organism was created.

  • Workflow_Documentation

    • Contains instructions for installing and running the R workflow to generate reference annotation tables using the GeneLab pipeline

Developed and maintained by:
Mike Lee