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  1. Knotty Knotty Public

    MFE method for predicting the psuedoknotted secondary structures of RNA sequences.

    C++ 4 3

  2. Iterative-HFold Iterative-HFold Public

    RNA Pseudoknotted Secondary Structure Prediction Using Relaxed Hierarchical Folding

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  3. DinoKnot DinoKnot Public

    RNA/DNA/PMO Pseudoknotted Secondary Structure Interaction Prediction Using Relaxed Hierarchical Folding

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  4. CCJ CCJ Public

    MFE method for predicting the psuedoknotted secondary structures of RNA sequences.

    C++ 2 2

  5. HFold HFold Public

    RNA Pseudoknotted Secondary Structure Prediction Using Strict Hierarchical Folding

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  6. KnotAli KnotAli Public

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