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@hodcroftlab

Hodcroft Lab (EVE)

The Epidemiology & Virus Evolution (EVE) Group at Swiss TPH!

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  1. covariants covariants Public

    Real-time updates and information about key SARS-CoV-2 variants, plus the scripts that generate this information.

    Python 320 110

  2. ppx-plots ppx-plots Public

    Plots of Pathoplexus data

    HTML 1

  3. evd68_demo evd68_demo Public

    Demo files for EVD68 build

  4. enterovirus_a71 enterovirus_a71 Public

    Snakemake pipeline for creating interactive real-time phylogenetic trees

    Python

  5. coxsackievirus_a6 coxsackievirus_a6 Public

    Code for Coxsackievirus A6 build on nextstrain.org

    Python

  6. poliovirus_recombination poliovirus_recombination Public

    Phylogenetics and recombination analysis of Enterovirus C with a focus on vaccine-derived polioviruses

    Python

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