|
1214 | 1214 | "from scipy.io import savemat\n",
|
1215 | 1215 | "\n",
|
1216 | 1216 | "# 1. save the image in matlab format as tmp_image.mat\n",
|
1217 |
| - "tmp_image = 'tmp_image'\n", |
| 1217 | + "tmp_image = 'tmp_image.mat'\n", |
1218 | 1218 | "data = nb.load(in_file).get_data()\n",
|
1219 | 1219 | "savemat(tmp_image, {b'data': data}, do_compression=False)"
|
1220 | 1220 | ]
|
|
1298 | 1298 | "\n",
|
1299 | 1299 | " def _run_interface(self, runtime): \n",
|
1300 | 1300 | " # Save the image in matlab format as tmp_image.mat\n",
|
1301 |
| - " tmp_image = 'tmp_image'\n", |
| 1301 | + " tmp_image = 'tmp_image.mat'\n", |
1302 | 1302 | " data = nb.load(self.inputs.in_file).get_data()\n",
|
1303 | 1303 | " savemat(tmp_image, {b'data': data}, do_compression=False)\n",
|
1304 | 1304 | " \n",
|
|
1374 | 1374 | "cell_type": "code",
|
1375 | 1375 | "execution_count": null,
|
1376 | 1376 | "metadata": {
|
1377 |
| - "solution2": "hidden", |
| 1377 | + "solution2": "shown", |
1378 | 1378 | "solution2_first": true
|
1379 | 1379 | },
|
1380 | 1380 | "outputs": [],
|
|
1386 | 1386 | "cell_type": "code",
|
1387 | 1387 | "execution_count": null,
|
1388 | 1388 | "metadata": {
|
1389 |
| - "solution2": "hidden" |
| 1389 | + "solution2": "shown" |
1390 | 1390 | },
|
1391 | 1391 | "outputs": [],
|
1392 | 1392 | "source": [
|
|
1411 | 1411 | "\n",
|
1412 | 1412 | " def _run_interface(self, runtime): \n",
|
1413 | 1413 | " # Save the image in matlab format as tmp_image.mat\n",
|
1414 |
| - " tmp_image = 'tmp_image'\n", |
| 1414 | + " tmp_image = 'tmp_image.mat'\n", |
1415 | 1415 | " data = nb.load(self.inputs.in_file).get_data()\n",
|
1416 | 1416 | " savemat(tmp_image, {b'data': data}, do_compression=False)\n",
|
1417 | 1417 | " \n",
|
|
1495 | 1495 | "source": [
|
1496 | 1496 | "!cat volume.txt"
|
1497 | 1497 | ]
|
| 1498 | + }, |
| 1499 | + { |
| 1500 | + "cell_type": "code", |
| 1501 | + "execution_count": null, |
| 1502 | + "metadata": {}, |
| 1503 | + "outputs": [], |
| 1504 | + "source": [] |
1498 | 1505 | }
|
1499 | 1506 | ],
|
1500 | 1507 | "metadata": {
|
1501 | 1508 | "kernelspec": {
|
1502 |
| - "display_name": "Python [default]", |
| 1509 | + "display_name": "Python 3", |
1503 | 1510 | "language": "python",
|
1504 | 1511 | "name": "python3"
|
1505 | 1512 | },
|
|
1513 | 1520 | "name": "python",
|
1514 | 1521 | "nbconvert_exporter": "python",
|
1515 | 1522 | "pygments_lexer": "ipython3",
|
1516 |
| - "version": "3.6.5" |
| 1523 | + "version": "3.7.8" |
1517 | 1524 | }
|
1518 | 1525 | },
|
1519 | 1526 | "nbformat": 4,
|
|
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