Skip to content

Navigation Menu

Appearance settings

biodatageeks

Explore
By company size
By use case
By industry
View all solutions
Topics
- AI
- DevOps
- Security
- Software Development
- View all
Explore
- GitHub Sponsors
  Fund open source developers
- The ReadME Project
  GitHub community articles
Repositories
- Enterprise platform
  AI-powered developer platform
Available add-ons
Pricing

Search code, repositories, users, issues, pull requests...

Search

Clear

Search syntax tips

Provide feedback

We read every piece of feedback, and take your input very seriously.

Include my email address so I can be contacted

Saved searches

Use saved searches to filter your results more quickly

Name

Query

To see all available qualifiers, see our documentation.

Appearance settings

You signed in with another tab or window. Reload to refresh your session. You signed out in another tab or window. Reload to refresh your session. You switched accounts on another tab or window. Reload to refresh your session.

Dismiss alert

biodatageeks

12 followers
Warsaw, Poland
https://biodatageeks.org
@biodatageeks
team@biodatageeks.org

Overview
Repositories 51
Projects
Packages
People

More

Overview
Repositories
Projects
Packages
People

Pinned Loading

sequila Public

SeQuiLa: Distributed analytics for genomics based on Apache Spark!

HTML 10 7
polars-bio Public

Blazing-Fast Bioinformatic Operations on Python DataFrames

Python 69 21

Repositories

Loading

Type

Select type

All Public Sources Forks Archived Mirrors Templates

Language

Select language

All Dockerfile GAP HCL HTML Java Jupyter Notebook Nextflow Python Rust Scala Shell Smarty TeX

Sort

Select order

Last updated Name Stars

Showing 10 of 51 repositories

polars-bio Public
Blazing-Fast Bioinformatic Operations on Python DataFrames

Python 69 Apache-2.0 21 35 10 Updated Jul 10, 2025
polars-bio-bench Public
Benchmarks of various genomic ranges operations

Jupyter Notebook 0 Apache-2.0 1 2 1 Updated Jul 8, 2025
datafusion-bio-formats Public

Rust 0 Apache-2.0 1 0 2 Updated Jul 4, 2025
genomic-publications-agent Public

Jupyter Notebook 0 0 2 1 Updated Jul 3, 2025
evo2 Public Forked from ArcInstitute/evo2
Genome modeling and design across all domains of life

Jupyter Notebook 0 Apache-2.0 321 0 0 Updated Mar 23, 2025
biodatageeks.github.io Public

TeX 0 MIT 0 0 1 Updated Mar 20, 2025
sequila-native Public
A set of native implementation of common bioinformatics algorithms to be used as Arrow-Datafusion or SeQuiLa (Apache Spark) extensions.

Rust 0 Apache-2.0 0 18 0 Updated Mar 13, 2025
big-data-lab Public
Self service for Data Science labs

HCL 0 Apache-2.0 48 2 1 Updated Jan 18, 2025
ds-notebooks Public

Jupyter Notebook 5 Apache-2.0 46 3 1 Updated Jan 18, 2025
datafusion-comet Public Forked from apache/datafusion-comet
Apache DataFusion Comet Spark Accelerator

Rust 0 Apache-2.0 222 0 1 Updated Nov 24, 2024

View all repositories

People

This organization has no public members. You must be a member to see who’s a part of this organization.

Top languages

Loading…

Uh oh!

There was an error while loading. Please reload this page.

Most used topics

Loading…

Uh oh!

There was an error while loading. Please reload this page.

Footer

© 2025 GitHub, Inc.

Footer navigation

Terms
Privacy
Security
Status
Docs
Contact

You can’t perform that action at this time.