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  1. single-cell-best-practices Public

    https://www.sc-best-practices.org

    Jupyter Notebook 938 220

  2. scvelo Public

    RNA Velocity generalized through dynamical modeling

    Python 451 108

  3. cellrank Public

    CellRank: dynamics from multi-view single-cell data

    Python 389 50

  4. scarches Public

    Reference mapping for single-cell genomics

    Jupyter Notebook 374 61

  5. scib Public

    Benchmarking analysis of data integration tools

    Python 363 69

  6. single-cell-transformer-papers Public

    HTML 321 41

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