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Jupyter Notebook 938 220
RNA Velocity generalized through dynamical modeling
Python 451 108
CellRank: dynamics from multi-view single-cell data
Python 389 50
Reference mapping for single-cell genomics
Jupyter Notebook 374 61
Benchmarking analysis of data integration tools
Python 363 69
HTML 321 41
Comprehensive pipeline for donor demultiplexing in single cell
A dashboard of everything in the theislab GitHub repository
MapQC - a metric for the evaluation of single-cell query-to-reference mappings
Modeling complex perturbations with CellFlow
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A datastructure for EHR data
Electronic Health Record Analysis with Python.
inferring regulatory cellular dynamics
Collection of Sphinx extensions similar to (but more flexible than) numpydoc