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publication-quality-plots

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Enables cellxgene to generate violin, stacked violin, stacked bar, heatmap, volcano, embedding, dot, track, density, 2D density, sankey and dual-gene plot in high-resolution SVG/PNG format. It also performs differential gene expression analysis and provides a Command Line Interface (CLI) for advanced users to perform analysis using python and R.

  • Updated May 25, 2025
  • Jupyter Notebook

RNAlytics: A Shiny-based web application for RNA-Seq analysis, offering differential expression, KEGG/GO enrichment, and interactive visualizations (PCA, Volcano, Heatmap, Gene Count). Built with R 4.4.3, it provides a user-friendly platform for researchers to explore genomic data. Deployable on Shiny Server for full control and scalability.

  • Updated Apr 21, 2025
  • R

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