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UIUCSinhaLab

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  1. GEMSTAT GEMSTAT Public

    Thermodynamics-based models of transcriptional regulation by enhancers: the roles of synergistic activation, cooperative binding and short-range repression

    C++ 6 8

  2. VarSAn VarSAn Public

    R 2 1

  3. STAP STAP Public

    A biophysical model for analysis of transcription factor interaction and binding site arrangement from genome-wide binding data. http://www.ncbi.nlm.nih.gov/pubmed/19956545

    C++ 1

  4. GEMSTAT_refinement_sampler GEMSTAT_refinement_sampler Public

    A tool to allow meaningful comparison of different refinement methods for GEMSTAT models.

    Shell 1 1

  5. Enhancer-Activity-Predictor Enhancer-Activity-Predictor Public

    R 1

  6. lncRNARN lncRNARN Public

    Script, code and data for analyses in the paper "Quantitative estimates of the regulatory influence of long non-coding RNAs on global gene expression variation using TCGA breast cancer transcriptom…

    R 1

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