Pombert Lab
- 13 followers
- Illinois Institute of Technology
- http://www.pombertlab.org
- jpombert@iit.edu
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Repositories
- SYNY Public
The SYNY pipeline investigates synteny between species by reconstructing protein clusters from gene pairs.
- Publication_scripts Public
This repository contains scripts from published or submitted manuscripts.
- A2GB Public
A2GB is a pipeline that will transform the genome annotation files exported from Apollo in preparation for sequence submission to NCBI’s GenBank.
- ID16S Public
This pipeline reconstructs the composition of species from 16S amplicon sequencing datasets.
- SSRG Public
The SSRG pipeline was created as a simple and focused tool to investigate genetic diversity between genomes.
- 3DFI Public
The 3DFI pipeline predicts the 3D structure of proteins and searches for structural homology in the 3D space.
- QueGO Public
The QueGO pipeline identifies potential homologs to proteins related to specific functionality.
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