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‎.gitignore

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‎_config.yml

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# Release settings
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release:
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version: 5.3.0
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version: 6.0.0
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‎docs/api

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‎docs/api6.0.0/demo/AFPFromFasta.html

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<!DOCTYPE HTML>
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<!-- NewPage -->
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<html lang="en">
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<head>
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<!-- Generated by javadoc (11.0.11) on Fri Oct 29 16:26:12 PDT 2021 -->
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<title>AFPFromFasta (biojava 6.0.0 API)</title>
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<div class="subTitle"><span class="packageLabelInType">Package</span>&nbsp;<a href="package-summary.html">demo</a></div>
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<h2 title="Class AFPFromFasta" class="title">Class AFPFromFasta</h2>
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<pre>public class <a href="../src-html/demo/AFPFromFasta.html#line.49">AFPFromFasta</a>
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extends <a href="https://docs.oracle.com/javase/8/docs/api/java/lang/Object.html?is-external=true" title="class or interface in java.lang" class="externalLink">Object</a></pre>
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<div class="block">Demo displaying a structural alignment from a FASTA file using <a href="../org/biojava/nbio/structure/io/FastaAFPChainConverter.html" title="class in org.biojava.nbio.structure.io"><code>FastaAFPChainConverter</code></a>.</div>
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<dl>
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<dt><span class="simpleTagLabel">Author:</span></dt>
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<dd>dmyerstu</dd>
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<th class="colConstructorName" scope="row"><code><span class="memberNameLink"><a href="#%3Cinit%3E()">AFPFromFasta</a></span>()</code></th>
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<td class="colLast">&nbsp;</td>
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<td class="colFirst"><code>static void</code></td>
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<th class="colSecond" scope="row"><code><span class="memberNameLink"><a href="#main(java.lang.String%5B%5D)">main</a></span>&#8203;(<a href="https://docs.oracle.com/javase/8/docs/api/java/lang/String.html?is-external=true" title="class or interface in java.lang" class="externalLink">String</a>[]&nbsp;args)</code></th>
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<h4>AFPFromFasta</h4>
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<pre>public&nbsp;<a href="../src-html/demo/AFPFromFasta.html#line.49">AFPFromFasta</a>()</pre>
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<pre class="methodSignature">public static&nbsp;void&nbsp;<a href="../src-html/demo/AFPFromFasta.html#line.51">main</a>&#8203;(<a href="https://docs.oracle.com/javase/8/docs/api/java/lang/String.html?is-external=true" title="class or interface in java.lang" class="externalLink">String</a>[]&nbsp;args)
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throws <a href="https://docs.oracle.com/javase/8/docs/api/java/io/IOException.html?is-external=true" title="class or interface in java.io" class="externalLink">IOException</a>,
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<a href="../org/biojava/nbio/structure/StructureException.html" title="class in org.biojava.nbio.structure">StructureException</a>,
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