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downloads.html
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<!DOCTYPE html>
<html lang="en">
<head>
<meta charset="utf-8">
<title>OpenWorm Downloads</title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="description" content="Download OpenWorm resources and data.">
<!-- REPLICATE THIS IN ALL PAGES -->
<!-- Le styles -->
<link href="css/bootstrap.css" rel="stylesheet">
<link rel="stylesheet" href="css/font-awesome.css">
<link href="css/bootstrap-responsive.css" rel="stylesheet">
<link href="css/main.css" rel="stylesheet">
<link href="css/docs.css" rel="stylesheet">
<!-- HTML5 shim, for IE6-8 support of HTML5 elements -->
<!--[if lt IE 9]>
<script src="http://html5shim.googlecode.com/svn/trunk/html5.js"></script>
<![endif]-->
<!-- Fav and touch icons - this code is outdated -->
<link rel="shortcut icon" href="favicon.ico">
<link rel="apple-touch-icon-precomposed" sizes="144x144" href="../assets/ico/apple-touch-icon-144-precomposed.png">
<link rel="apple-touch-icon-precomposed" sizes="114x114" href="../assets/ico/apple-touch-icon-114-precomposed.png">
<link rel="apple-touch-icon-precomposed" sizes="72x72" href="../assets/ico/apple-touch-icon-72-precomposed.png">
<link rel="apple-touch-icon-precomposed" href="../assets/ico/apple-touch-icon-57-precomposed.png">
<div class="navbar navbar-inverse navbar-fixed-top">
<div class="navbar-inner" id="head-nav">
</div>
</div>
<script src="js/jquery-3.6.0.js"></script>
<script>
// get head-nav and foot-nav with jquery (get is async)
$.get('header-content.html', function(data) {
$('#head-nav').html(data);
})
$.get('footer-content.html', function(data) {
$('#foot-nav').html(data);
})
</script>
</head>
<body>
<div id="pjax-content">
<!-- END REPEAT-->
<header class="jumbotron subhead" id="overview">
<div class="container">
<!--<div class="openworm_logo_header"></div>-->
<h1>Downloads</h1>
<p class="lead">
This is the place to grab some of the outputs of the OpenWorm project, plus resources and demos.
</p>
</div>
</header>
<div class="container">
<div class="row">
<div class="span3 bs-docs-sidebar">
<ul class="nav nav-list bs-docs-sidenav">
<li>
<a href="#docker"><i class="fa fa-chevron-right"></i>Docker</a>
</li>
<li>
<a href="#coder"><i class="fa fa-chevron-right"></i>For coders</a>
</li>
<li>
<a href="#scientist"><i class="fa fa-chevron-right"></i>For scientists</a>
</li>
</ul>
</div>
<div class="span9">
<br/><br/>
<div class="alert">
<button type="button" class="close" data-dismiss="alert">×</button>
<strong>Warning:</strong> You can't download the whole virtual worm, we're not quite there yet! :)
</div>
<!-- Docker ================================================== -->
<section id="docker">
<div class="page-header">
<h1>Docker simulation stack</h1>
</div>
<div class="pagination-centered">
<p class="lead">
We have created a <strong>Docker container</strong> which contains all of the major components of the <a href="http://docs.openworm.org/projects" target="_blank">simulation stack</a> we have built so far. It can be used to run a <strong>preliminary model</strong> of the worm in 3D on your computer.
<br/>
</p>
<br/>
<img src="https://raw.githubusercontent.com/openworm/OpenWorm/master/img/worm-crawling.gif"></img>
<br/>
<br/>
<a class="btn btn-primary btn-large" href="https://github.com/openworm/OpenWorm/blob/master/README.md#quickstart" target="_blank">OpenWorm Docker</a>
</div>
<div class="row-fluid pagination-centered">
</div>
</section>
<!-- Coder ================================================== -->
<section id="coder">
<div class="page-header">
<h1>For coders</h1>
</div>
<div class="pagination-centered">
<i class="fa fa-github-alt fa-xl"></i>
<br/><br/><br/>
</div>
<div class="row-fluid pagination-centered">
<p class="lead span6">
<strong>Geppetto</strong> is a web-based platform for visualizing and simulating data and models. It started in the OpenWorm project and is being used for a number of other projects across neuroscience.
<br/><br/><a class="btn btn-primary btn-large" href="https://github.com/openworm/org.geppetto/releases" target="_blank">Geppetto releases</a>
</p>
<p class="lead span6">
The 3D worm body model in OpenWorm is being developed in <strong>Sibernetic</strong>. you can download this application and run the particle hydrodynamics simulations on your own machine.
<br/><br/><a class="btn btn-primary btn-large" href="https://github.com/openworm/sibernetic" target="_blank">Get Sibernetic</a>
</p>
</div>
<br/>
<div class="row-fluid pagination-centered">
<p class="lead span6">
We have developed a Python library, <strong>owmeta</strong>, which gives easy programmatic access to a wide range of anatomical and physiological data about <i>C. elegans</i>.
<br/><br/><a class="btn btn-primary btn-large" href="https://github.com/openworm/owmeta" target="_blank">Download owmeta</a>
</p>
<p class="lead span6">
The <strong>c302</strong> framework allows network models of the <i>C. elegans</i> nervous system to be generated at various levels of detail to simulate the activity of the brain of the worm.
<br/><br/><a class="btn btn-primary btn-large" href="https://github.com/openworm/c302" target="_blank">Install c302</a>
</p>
</div>
<div class="pagination-centered">
<br/>
<p class="lead">
Find out how these and other software packages fit together on our <a href="http://docs.openworm.org/projects" target="_blank">OpenWorm projects page</a>.
<br/>
</p>
</div>
</section>
<!-- Scientist ================================================== -->
<section id="scientist">
<div class="page-header">
<h1>For scientists</h1>
</div>
<div class="pagination-centered">
<p class="lead">
We have created a number of <strong>scientific resources</strong> aimed at the <i>C. elegans</i> community to assist research into this fascinating organism.
<br/>
</p>
<br/>
<a class="btn btn-primary btn-large" href="science.html" target="_blank">Scientific resources</a>
</div>
</section>
</div>
</div>
</div>
<!-- FOOT: DUPLICATE THE FOLLOWING IN ALL PAGES -->
</div><!-- end pjax content -->
<!-- footer
================================================== -->
<div id="foot-nav"></div>
<!-- foot-nav is filled with script in head -->
<!-- Le javascript
================================================== -->
<!-- at end of the document so the pages load faster -->
<!-- load other resources asynchronously: -->
<script src="js/bootstrap.js" async></script>
<script src="js/jquery.parss.uncompressed.js" async></script>
<script src="http://platform.twitter.com/widgets.js" async></script>
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<script src="js/jquery.pjax.js"></script>
<script src="js/main.js" defer></script>
</body>
</html>