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Release DynaCLR artifacts (model, dataset) on Hugging Face

Status: Open.

#266 In mehta-lab/VisCy;

· NielsRogge opened on Jul 2, 2025

Implement batched GPU transforms

enhancementNew feature or requestNew feature or request

representationRepresentation learning (SSL)Representation learning (SSL)

translationImage translation (VS)Image translation (VS)

Status: Open.

#232 In mehta-lab/VisCy;

· ziw-liu opened on Mar 27, 2025

· 

v0.4.0

Remove Cellpose dependency

maintenanceMaintenance workMaintenance work

translationImage translation (VS)Image translation (VS)

Status: Open.

#231 In mehta-lab/VisCy;

· ziw-liu opened on Mar 26, 2025

· 

v0.4.0

Add a method ignore certain wells for training/validation

enhancementNew feature or requestNew feature or request

Status: Open.

#205 In mehta-lab/VisCy;

· edyoshikun opened on Nov 18, 2024

OOM issues with 3D FCMAE fine-tuning

bugSomething isn't workingSomething isn't working

translationImage translation (VS)Image translation (VS)

Status: Open.

#201 In mehta-lab/VisCy;

· edyoshikun opened on Nov 5, 2024

Investigate kvikio

enhancementNew feature or requestNew feature or request

Status: Open.

#199 In mehta-lab/VisCy;

· ziw-liu opened on Nov 4, 2024

Add PCA to prediction of contrastive models

enhancementNew feature or requestNew feature or request

representationRepresentation learning (SSL)Representation learning (SSL)

Status: Open.

#191 In mehta-lab/VisCy;

· ziw-liu opened on Oct 18, 2024

explainability tools for representation

enhancementNew feature or requestNew feature or request

representationRepresentation learning (SSL)Representation learning (SSL)

Status: Open.

#157 In mehta-lab/VisCy;

· mattersoflight opened on Sep 9, 2024

· 

v0.4.0

Log embeddings in TensorBoard

enhancementNew feature or requestNew feature or request

representationRepresentation learning (SSL)Representation learning (SSL)

Status: Open.

#155 In mehta-lab/VisCy;

· ziw-liu opened on Sep 1, 2024

· 

v0.4.0

Move to NumPy style docstrings?

documentationImprovements or additions to documentationImprovements or additions to documentation

maintenanceMaintenance workMaintenance work

Status: Open.

#133 In mehta-lab/VisCy;

· ziw-liu opened on Aug 13, 2024

· 

v0.4.0

Support loading data from a specific resolution of a .zarr pyramid

enhancementNew feature or requestNew feature or request

translationImage translation (VS)Image translation (VS)

Status: Open.

#125 In mehta-lab/VisCy;

· talonchandler opened on Aug 7, 2024

· 

v0.4.0

API for 2D UNeXt2 model construction needs clarity

Status: Open.

#107 In mehta-lab/VisCy;

· mattersoflight opened on Jul 9, 2024