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PomBase

The S. pombe Genome Database

5 followers
Cambridge, UK
https://www.pombase.org
@pombase@mstdn.science
staff@pombase.org

Overview
Repositories 40
Projects 1
Packages
People 4

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Overview
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README.md

PomBase is a model organism database that provides organization of and access to scientific data for the fission yeast Schizosaccharomyces pombe.

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curation Public

PomBase curation

7
fypo Public

Fission Yeast Phenotype Ontology

Makefile 16 6
canto Public

The PomBase community curation tool

JavaScript 19 7
pombase-chado Public

PomBase code for accessing Chado

Perl 5 3
website Public template

PomBase website code

TypeScript 6 1

Repositories

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Showing 10 of 40 repositories

pombase-chado-json Public
Read a PomBase Chado database and write it as JSON

Rust 1 MIT 1 0 0 Updated Jul 19, 2025
website Public template
PomBase website code

TypeScript 6 MIT 1 89 1 Updated Jul 17, 2025
pombase-python-web Public
Python web code for the PomBase project

HTML 0 1 0 0 Updated Jul 16, 2025
canto Public
The PomBase community curation tool

JavaScript 19 7 180 0 Updated Jul 16, 2025
allele_qc Public
Quality control for PomBase alleles

Python 1 MIT 1 10 0 Updated Jul 16, 2025
pombase-gocam-process Public

Rust 0 MIT 0 0 0 Updated Jul 15, 2025
pombase-gocam Public
GO-CAM JSON model parsing code

Rust 0 MIT 1 17 0 Updated Jul 15, 2025
genome_changelog Public

Python 1 MIT 1 1 1 Updated Jul 9, 2025
pombase-gocam-tool Public
PomBase tool for processing GO-CAM models

Rust 0 MIT 0 0 0 Updated Jul 9, 2025
fypo Public
Fission Yeast Phenotype Ontology

Makefile 16 CC-BY-4.0 6 131 1 Updated Jul 8, 2025

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