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giab

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Daylily-Informatics / daylily-ephemeral-cluster

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A NGS analysis framework for WGS data, which automates the entire process of spinning up AWS EC2 spot instances and processing FASTQ to snvVCF in <60m, for dollars a sample and achieving Fscores of 0.998.

aws bioinformatics scalable ec2 ngs slurm budgeting bioinformatics-pipeline informatics scaling cwl wgs ephemeral genomic-data-analysis human-genome aws-parallelcluster snv-call giab aws-parallel-cluster
  • Updated Jul 2, 2025
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