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obophenotype

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  1. human-phenotype-ontology human-phenotype-ontology Public

    Ontology for the description of human clinical features

    Makefile 305 53

  2. cell-ontology cell-ontology Public

    An ontology of cell types

    Makefile 167 53

  3. uberon uberon Public

    An ontology of gross anatomy covering metazoa. Works in concert with https://github.com/obophenotype/cell-ontology

    Emacs Lisp 138 30

  4. upheno upheno Public

    The Unified Phenotype Ontology (uPheno) integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.

    Makefile 79 18

  5. bio-attribute-ontology bio-attribute-ontology Public

    source files for OBA (Ontology of Biological Attributes)

    Jupyter Notebook 27 11

  6. ncbitaxon ncbitaxon Public

    Build for NCBITaxon

    Python 27 7

Repositories

Showing 10 of 63 repositories
  • upheno-dev Public

    Framework for the automated construction of uPheno 2.0

    Jupyter Notebook 5 MIT 5 37 7 Updated Mar 30, 2025
  • bio-attribute-ontology Public

    source files for OBA (Ontology of Biological Attributes)

    Jupyter Notebook 27 CC0-1.0 11 80 7 Updated Mar 28, 2025
  • uberon Public

    An ontology of gross anatomy covering metazoa. Works in concert with https://github.com/obophenotype/cell-ontology

    Emacs Lisp 138 30 313 (2 issues need help) 22 Updated Mar 27, 2025
  • cell-ontology Public

    An ontology of cell types

    Makefile 167 CC-BY-4.0 53 289 26 Updated Mar 27, 2025
  • c-elegans-gross-anatomy-ontology Public

    C. elegans Gross Anatomy Ontology

    Makefile 7 CC-BY-4.0 2 7 0 Updated Mar 26, 2025
  • Shell 4 CC-BY-4.0 3 1 0 Updated Mar 25, 2025
  • human-phenotype-ontology Public

    Ontology for the description of human clinical features

    Makefile 305 53 229 9 Updated Mar 23, 2025
  • developmental-stage-ontologies Public

    Source files for various species-specific stage ontologies

    Makefile 10 5 52 0 Updated Mar 18, 2025
  • ncbitaxon Public

    Build for NCBITaxon

    Python 27 BSD-3-Clause 7 29 2 Updated Mar 17, 2025
  • pro_obo_slim Public

    A repo to generate a pro slim for the OBO phenotype organisation

    Makefile 1 1 0 0 Updated Mar 14, 2025

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