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@AllenInstitute

Allen Institute

Please visit http://alleninstitute.github.io/ for more information.

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  1. AllenSDK Public

    code for reading and processing Allen Institute for Brain Science data

    Jupyter Notebook 363 155

  2. dipde Public

    Numerical solver for coupled population density equations

    Python 24 15

Repositories

Showing 10 of 431 repositories
  • deep-neurographs Public

    A Python package that corrects split mistakes in a fragmented neuron segmentation using a graph neural network.

    Python 6 MIT 0 0 0 Updated Jul 14, 2025
  • biofile-finder Public

    An open-use web application created for easy access, collaboration, and sharing of datasets through rich metadata search, filter, sort, and direct viewing in common industry applications or in our web-based 3D Volume Viewer.

    TypeScript 12 BSD-3-Clause 3 69 2 Updated Jul 14, 2025
  • cell_type_constellations Public Forked from danielsf/cell_type_constellations

    Prototype utilities for creating constellation plots based on cell type taxonomies.

    Jupyter Notebook 0 2 0 0 Updated Jul 14, 2025
  • vis Public

    Typescript packages for building big-data visualization tools & components, with examples for a variety of common data types & formats

    TypeScript 5 BSD-3-Clause 1 11 5 Updated Jul 14, 2025
  • bmtk-workshop Public
    Jupyter Notebook 4 8 2 1 Updated Jul 14, 2025
  • asap-modules Public

    Shared repo for EM connectomics and Array Tomography render based image processing modules

    Python 15 BSD-2-Clause 5 14 3 Updated Jul 14, 2025
  • MIES Public

    Multichannel Igor Electrophysiology Suite

    IGOR Pro 28 9 276 19 Updated Jul 14, 2025
  • mtrain_regimens Public

    Repository to track training stages and regimens for visual behavior

    Python 3 4 14 0 Updated Jul 14, 2025
  • Jupyter Notebook 1 MIT 0 0 0 Updated Jul 14, 2025
  • openscope_databook Public

    OpenScope databook: a collaborative, versioned, data-centric collection of foundational analyses for reproducible systems neuroscience 🐁🧠🔬🖥️📈

    Python 69 24 19 0 Updated Jul 14, 2025

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