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This repo collects research papers that use AI tools and are in the field of scientific research (including computer science, agronomy, chemistry, physics, etc.). We call this method as Deep-Research.

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Awesome-Deep-Research-Towards AI Scientist

Awesome License: MIT

AI-powered research assistant has attracted great attention in the community. It is a key step for mankind to move towards general artificial intelligence (AGI)! This repo is dedicated to organizing the current technical routes and papers of Deep Research, hoping to help research in this field.

πŸ“’NOTE: This is a popular work recently, so the codes of many papers have not been open sourced. If you know that some work has been updated, please leave a message in the issues and I will update it in time!

πŸ“’NOTE: I'm updating relevant research all the time...

πŸ“’NOTE: If you have any questions, please don't hesitate to contact us at any of the following emails: fengpeilin@pjlab.org.cn

⭐ This repository hosts a curated collection of literature associated with Deep Research(AI-powered research assistant). Please share a ⭐ if this project does help!

Contents

Related Surveys

Date Paper Link
25.02 Transforming Science with Large Language Models: A Survey on AI-assisted Scientific Discovery, Experimentation, Content Generation, and Evaluation Link
25.02 Survey on Vision-Language-Action Models Link
24.12 (ITiCSE-WGR 2024) Beyond the Hype: A Comprehensive Review of Current Trends in Generative AI Research, Teaching Practices, and Tools Link
24.08 A Multi-Year Grey Literature Review on AI-assisted Test Automation Link
24.05 A Survey on RAG Meeting LLMs: Towards Retrieval-Augmented Large Language Models Link
24.04 From Persona to Personalization: A Survey on Role-Playing Language Agents Link
24.02 (Artif. Intell 2024) Artificial Intelligence for Literature Reviews: Opportunities and Challenges Link
23.10 A Survey on LLM-Generated Text Detection: Necessity, Methods, and Future Directions Link
23.07 Natural Language Generation and Understanding of Big Code for AI-Assisted Programming: A Review Link

Awesome Frameworks

These widely used open source frameworks can effectively help the development of Deep Research.

Date Repository Description Link
23.08 AutoGen AutoGen is a framework for creating multi-agent AI applications that can act autonomously or work alongside humans LinkGitHub stars
23.08 lightllm A Python-based LLM (Large Language Model) inference and serving framework LinkGitHub stars
23.06 AutoChain Building generative agents based on objectives expressed in natural language LinkGitHub stars
23.06 ollama A framework that simplifies the development of large-scale machine learning models LinkGitHub stars
23.06 vllm A fast and easy-to-use library for LLM inference and serving LinkGitHub stars
23.06 web-llm WebLLM is a high-performance in-browser LLM inference engine that brings language model inference directly onto web browsers with hardware acceleration. LinkGitHub stars
23.04 AgentGPT AgentGPT allows you to configure and deploy Autonomous AI agents LinkGitHub stars
23.04 JARVIS The mission of JARVIS is to explore artificial general intelligence (AGI) and deliver cutting-edge research to the whole community. LinkGitHub stars
23.04 camel CAMEL is an open-source community dedicated to finding the scaling laws of agents. LinkGitHub stars
23.03 AutoGPT AutoGPT is a powerful platform that allows you to create, deploy, and manage continuous AI agents that automate complex workflows. LinkGitHub stars
22.11 langchain A framework for developing applications powered by large language models (LLMs). LinkGitHub stars
22.11 llama_index LlamaIndex (GPT Index) is a data framework for your LLM application LinkGitHub stars

Awesome Publications

Foundation Research

Date Paper Figure Link Code
2025.03 Mask-DPO: Generalizable Fine-grained Factuality Alignment of LLMs image Link CodeGitHub stars
2023.10πŸ”₯ OpenAgents: An Open Platform for Language Agents in the Wild image Link CodeGitHub stars
2023.10πŸ”₯ MetaAgents: Simulating Interactions of Human Behaviors for LLM-based Task-oriented Coordination via Collaborative Generative Agents image Link CodeGitHub stars
2023.08 (ICLR 2024)πŸ”₯ MetaGPT: Meta Programming for A Multi-Agent Collaborative Framework image Link CodeGitHub stars
2023.08πŸ”₯ AutoGen: Enabling Next-Gen LLM Applications via Multi-Agent Conversation image Link CodeGitHub stars
2022.03 (ICLR 2023) Self-Consistency Improves Chain of Thought Reasoning in Language Models image Link
2022.03 (NeurIPS 2022) Training language models to follow instructions with human feedback image Link
2022.01 (NeurIPS 2022) Chain-of-Thought Prompting Elicits Reasoning in Large Language Models image Link
2017 (SNAPL 2017) Natural Language is a Programming Language: Applying Natural Language Processing to Software Development image Link

Coorperation Strategy Research

Date Paper Figure Link Code
2025.01 Debate Helps Weak-to-Strong Generalization image Link
2024.12 LLMs as Debate Partners: Utilizing Genetic Algorithms and Adversarial Search for Adaptive Arguments image Link
2024.06 Generative AI Voting: Fair Collective Choice is Resilient to LLM Biases and Inconsistencies image Link CodeGitHub stars
2023.08 (ICLR 2024)πŸ”₯ AgentVerse: Facilitating Multi-Agent Collaboration and Exploring Emergent Behaviors image Link CodeGitHub stars
2023.08 (ICLR 2024) ChatEval: Towards Better LLM-based Evaluators through Multi-Agent Debate image Link CodeGitHub stars
2023.07 (ACL 2024)πŸ”₯ ChatDev: Communicative Agents for Software Development image Link CodeGitHub stars
2023.03 (NeurIPS 2023)πŸ”₯ CAMEL: Communicative Agents for "Mind" Exploration of Large Language Model Society image Link CodeGitHub stars

Awesome AI-powered Researchers

Date Paper Figure Link Code
2025.03πŸ”₯ AI-Researcher: Fully-Automated Scientific Discovery with LLM Agents image Coming soon! CodeGitHub stars
2025.03πŸ”₯ DeepReview: Improving LLM-based Paper Review with Human-like Deep Thinking Process image Link CodeGitHub stars Demo
2025.02 AI-Instruments: Embodying Prompts as Instruments to pdftract & Reflect Graphical Interface Commands as General-Purpose Tools image Link
2025.02 From Documents to Dialogue: Building KG-RAG Enhanced AI Assistants image Link
2025.02 CodeA11y: Making AI Coding Assistants Useful for Accessible Web Development image Link CodeGitHub stars
2025.02 Automated Capability Discovery via Model Self-Exploration image Link CodeGitHub stars
2025.02 Accelerating Scientific Research Through a Multi-LLM Framework image Link
2025.02 Knowledge Synthesis of Photosynthesis Research Using a Large Language Model image Link CodeGitHub stars
2025.02 ChartCitor: Multi-Agent Framework for Fine-Grained Chart Visual Attribution image Link
2025.02 Towards an AI co-scientist image Link
2025.02πŸ”₯ AIDE: AI-Driven Exploration in the Space of Code image Link CodeGitHub stars
2025.02πŸ”₯ AutoAgent: A Fully-Automated and Zero-Code Framework for LLM Agents image Link CodeGitHub stars
2025.01 Automating Care by Self-maintainability for Full Laboratory Automation image Link
2025.01 Knowledge Retrieval Based on Generative AI image Link
2025.01 Dolphin: Closed-loop Open-ended Auto-research through Thinking, Practice, and Feedback image Link CodeGitHub stars
2025.01πŸ”₯ Agent Laboratory: Using LLM Agents as Research Assistants image Link CodeGitHub stars
2024.12 Automated Code Review In Practice image Link
2024.12 VISION: A Modular AI Assistant for Natural Human-Instrument Interaction at Scientific User Facilities image Link Video
2024.12 EvoPat: A Multi-LLM-based Patents Summarization and Analysis Agent image Link
2024.12 LLMs can Realize Combinatorial Creativity: Generating Creative Ideas via LLMs for Scientific Research image Link
2024.12 (Technique Report) TapeAgents: a Holistic Framework for Agent Development and Optimization image Link CodeGitHub stars
2024.12 Multi-Agent System for Cosmological Parameter Analysis image Link CodeGitHub stars
2024.12 MetaScientist: A Human-AI Synergistic Framework for Automated Mechanical Metamaterial Design image Link Demo
2024.12 A Retrieval-Augmented Generation Framework for Academic Literature Navigation in Data Science image Link
2024.11 CycleResearcher: Improving Automated Research via Automated Review image Link CodeGitHub stars
2024.11 AIGS: Generating Science from AI-Powered Automated Falsification image Link CodeGitHub stars
2024.11 MatPilot: an LLM-enabled AI Materials Scientist under the Framework of Human-Machine Collaboration image Link
2024.11 Semantic Navigation for AI-assisted Ideation image Link
2024.10 AiSciVision: A Framework for Specializing Large Multimodal Models in Scientific Image Classification image Link CodeGitHub stars
2024.10 Leveraging Large Language Models for Code Translation and Software Development in Scientific Computing image Link
2024.10 AdaptoML-UX: An Adaptive User-centered GUI-based AutoML Toolkit for Non-AI Experts and HCI Researchers image Link CodeGitHub stars
2024.10 (EMNLP 2024) Enhancing AI Assisted Writing with One-Shot Implicit Negative Feedback image Link CodeGitHub stars
2024.10 Beyond-RAG: Question Identification and Answer Generation in Real-Time Conversations image Link
2024.10 A Multi-LLM Orchestration Engine for Personalized, Context-Rich Assistance
2024.10 Many Heads Are Better Than One: Improved Scientific Idea Generation by A LLM-Based Multi-Agent System image Link CodeGitHub stars
2024.09 NoTeeline: Supporting Real-Time, Personalized Notetaking with LLM-Enhanced Micronotes image Link CodeGitHub stars
2024.09 Steward: Natural Language Web Automation image Link CodeGitHub stars
2024.09 PatentGPT: A Large Language Model for Patent Drafting Using Knowledge-based Fine-tuning Method image Link
2024.09 (Technique Report) SciAgents: Automating scientific discovery through multi-agent intelligent graph reasoning image Link CodeGitHub stars
2024.09 Collective Predictive Coding as Model of Science: Formalizing Scientific Activities Towards Generative Science image Link
2024.08 Genesis: Towards the Automation of Systems Biology Research image Link
2024.08 (Technique Report)πŸ”₯ The AI Scientist: Towards Fully Automated Open-Ended Scientific Discovery image Link CodeGitHub stars
2024.07 AI-Assisted SQL Authoring at Industry Scale image Link
2024.07 SeqMate: A Novel Large Language Model Pipeline for Automating RNA Sequencing image Link
2024.07 (UIST 2024) Improving Steering and Verification in AI-Assisted Data Analysis with Interactive Task Decomposition image Link
2024.06 The Use of AI-Robotic Systems for Scientific Discovery Link
2024.04 (ETRA 2024) SARA: Smart AI Reading Assistant for Reading Comprehension image Link
2024.06 BugBlitz-AI: An Intelligent QA Assistant image Link
2024.05 (ACL 2024) Automated Focused Feedback Generation for Scientific Writing Assistance image Link CodeGitHub stars
2024.05 (NLDB 2024) A FAIR and Free Prompt-based Research Assistant image Link
2024.05 A System for Quantifying Data Science Workflows with Fine-Grained Procedural Logging and a Pilot Study image Link
2024.04 (XP 2024) Exploring Human-AI Collaboration in Agile: Customised LLM Meeting Assistants image Link
2024.04 ResearchAgent: Iterative Research Idea Generation over Scientific Literature with Large Language Models image Link CodeGitHub stars
2024.04 Empowering Biomedical Discovery with AI Agents image Link
2024.04 (NAACL 2024) DOCMASTER: A Unified Platform for Annotation, Training, & Inference in Document Question-Answering image Link CodeGitHub stars
2024.03πŸ”₯ ChatDBG: An AI-Powered Debugging Assistant image Link CodeGitHub stars
2024.03 AutoDev: Automated AI-Driven Development image Link
2024.02 Streamlining the Selection Phase of Systematic Literature Reviews (SLRs) Using AI-Enabled GPT-4 Assistant API Link
2024.02 (SIGSOFT 2024) Multi-line AI-assisted Code Authoring image Link
2024.02 An Autonomous Large Language Model Agent for Chemical Literature Data Mining image Link
2024.02 (ICML 2024) DS-Agent: Automated Data Science by Empowering Large Language Models with Case-Based Reasoning image Link CodeGitHub stars
2024.02 Prompt-Time Symbolic Knowledge Capture with Large Language Models Link CodeGitHub stars
2024.01 (Technique Report) Weaver: Foundation Models for Creative Writing image Link Demo
2024.01 LLM-Powered Code Vulnerability Repair with Reinforcement Learning and Semantic Reward ![image](https://github.com/Peilin-FF/Awesome-Deep-Research/blob/main/assets/Awesome_AI-powered_Researchers/LLM-Powered Code Vulnerability Repair with Reinforcement Learning and Semantic Reward.png)
2023.12 (AAAI 2024) GEAR-Up: Generative AI and External Knowledge-based Retrieval Upgrading Scholarly Article Searches for Systematic Reviews image Link Demo
2023.12 Agent-based Learning of Materials Datasets from Scientific Literature image Link CodeGitHub stars
2023.12 Open Datasheets: Machine-readable Documentation for Open Datasets and Responsible AI Assessments image Link CodeGitHub stars
2023.11 (Technique Report) AcademicGPT: Empowering Academic Research image Link
2023.11 (ECCV 2024)πŸ”₯ LLaVA-Plus: Learning to Use Tools for Creating Multimodal Agents image Link CodeGitHub stars
2023.10 (ICLR 2024) GeoLLM: Extracting Geospatial Knowledge from Large Language Models image Link CodeGitHub stars
2023.07 (ICLR 2024)πŸ”₯ ToolLLM: Facilitating Large Language Models to Master 16000+ Real-world APIs image Link CodeGitHub stars
2023.06 AssistGPT: A General Multi-modal Assistant that can Plan, Execute, Inspect, and Learn image Link CodeGitHub stars
2023.06 Interactive Editing for Text Summarization image Link
2023.06 Accelerating science with human-aware artificial intelligence image Link
2023.04πŸ”₯ ChemCrow: Augmenting large-language models with chemistry tools image Link CodeGitHub stars
2023.04 Beyond Summarization: Designing AI Support for Real-World Expository Writing Tasks image Link
2023.02 (ACL 2023) CARE: Collaborative AI-Assisted Reading Environment image Link CodeGitHub stars
2022.11 (IEEE Trans 2023) AI Assistants: A Framework for Semi-Automated Data Wrangling image Link
2022.10 Artificial Intelligence for Scientific Research: Authentic Research Education Framework image Link
2022.08 Effidit: Your AI Writing Assistant image Link Code
2022.02 (AAAI 2021) AI Research Associate for Early-Stage Scientific Discovery image Link
2021.04 Accelerating science with human versus alien artificial intelligences image Link
2021.02 (ACM Trans 2022) Documentation Matters: Human-Centered AI System to Assist Data Science Code Documentation in Computational Notebooks image Link

Evaluation

Evaluation Methods

Date Paper Figure Link Code
2025.03 Enabling AI Scientists to Recognize Innovation: A Domain-Agnostic Algorithm for Assessing Novelty image Link
2025.03 The impact of AI and peer feedback on research writing skills: a study using the CGScholar platform among Kazakhstani scholars image Link
2025.02 Supporting the development of Machine Learning for fundamental science in a federated Cloud with the AI_INFN platform image Link
2025.02 EAIRA: Establishing a Methodology for Evaluating AI Models as Scientific Research Assistants image Link
2025.02 Bridging Logic Programming and Deep Learning for Explainability through ILASP image Link
2025.01 Self-Explanation in Social AI Agents image Link
2025.01 Fine-Grained Appropriate Reliance: Human-AI Collaboration with a Multi-Step Transparent Decision Workflow for Complex Task Decomposition image Link
2024.12 CATER: Leveraging LLM to Pioneer a Multidimensional, Reference-Independent Paradigm in Translation Quality Evaluation Link
2024.10 GigaCheck: Detecting LLM-generated Content image Link
2024.10 Vital Insight: Assisting Experts' Context-Driven Sensemaking of Multi-modal Personal Tracking Data Using Visualization and Human-In-The-Loop LLM Agents image Link
2024.10 Aligning AI-driven discovery with human intuition image Link CodeGitHub stars
2024.09 Benchmarking ChatGPT, Codeium, and GitHub Copilot: A Comparative Study of AI-Driven Programming and Debugging Assistants Link
2024.06 (SSDBM 2024) AI Data Readiness Inspector (AIDRIN) for Quantitative Assessment of Data Readiness for AI image Link
2024.06 A Knowledge-Component-Based Methodology for Evaluating AI Assistants Link
2023.04 Evaluating the Code Quality of AI-Assisted Code Generation Tools: An Empirical Study on GitHub Copilot, Amazon CodeWhisperer, and ChatGPT image Link CodeGitHub stars
2023.04 (UIST 2023) VISAR: A Human-AI Argumentative Writing Assistant with Visual Programming and Rapid Draft Prototyping image Link
2021.10 Explaining Reward Functions to Humans for Better Human-Robot Collaboration image Link
2021.10 (ICANN 2021) Learning to Assist Agents by Observing Them image Link

Benchmark

Date Paper Figure Link Dataset
2025.02 Theoretical Physics Benchmark (TPBench) -- a Dataset and Study of AI Reasoning Capabilities in Theoretical Physics image Link Project
2025.02 Insect-Foundation: A Foundation Model and Large Multimodal Dataset for Vision-Language Insect Understanding image Link Project
2025.02 Minerva: A Programmable Memory Test Benchmark for Language Models image Link ProjectGitHub stars
2025.02 UGPhysics: A Comprehensive Benchmark for Undergraduate Physics Reasoning with Large Language Models image Link CodeGitHub stars
2025.02 Learning to Coordinate with Experts image Link CodeGitHub stars
2025.02 Auto-Bench: An Automated Benchmark for Scientific Discovery in LLMs image Link Project
2024.12 How Well Do LLMs Generate Code for Different Application Domains? Benchmark and Evaluation image Link ProjectGitHub stars
2024.11 LLM4DS: Evaluating Large Language Models for Data Science Code Generation image Link ProjectGitHub stars
2024.11 (NeurIPS 2024) RedCode: Risky Code Execution and Generation Benchmark for Code Agents image Link ProjectGitHub stars
2024.11 (NeurIPS 2024) SeafloorAI: A Large-scale Vision-Language Dataset for Seafloor Geological Survey image Link ProjectGitHub stars
2024.11 (NeurIPS 2024) INQUIRE: A Natural World Text-to-Image Retrieval Benchmark image Link Project
2024.10 AAAR-1.0: Assessing AI's Potential to Assist Research image Link Project
2024.10 AutoPenBench: Benchmarking Generative Agents for Penetration Testing image Link ProjectGitHub stars
2024.10 CodeMMLU: A Multi-Task Benchmark for Assessing Code Understanding Capabilities of CodeLLMs image Link ProjectGitHub stars
2024.09 (EMNLP 2024) UniSumEval: Towards Unified, Fine-Grained, Multi-Dimensional Summarization Evaluation for LLMs image Link ProjectGitHub stars
2024.09 CI-Bench: Benchmarking Contextual Integrity of AI Assistants on Synthetic Data image Link Project
2024.09 ChemDFM-X: Towards Large Multimodal Model for Chemistry image Link ProjectGitHub stars
2024.09 DSBench: How Far Are Data Science Agents to Becoming Data Science Experts? image Link ProjectGitHub stars
2024.08 (NeurIPS 2024) GMAI-MMBench: A Comprehensive Multimodal Evaluation Benchmark Towards General Medical AI image Link Project
2024.07 MMSci: A Dataset for Graduate-Level Multi-Discipline Multimodal Scientific Understanding image Link ProjectGitHub stars
2024.07 (NeurIPS 2024) SciCode: A Research Coding Benchmark Curated by Scientists image Link Project
2024.06 MASSW: A New Dataset and Benchmark Tasks for AI-Assisted Scientific Workflows image Link ProjectGitHub stars
2024.05 "Turing Tests" For An AI Scientist image Link ProjectGitHub stars
2024.02 (ECCV 2024) LHRS-Bot: Empowering Remote Sensing with VGI-Enhanced Large Multimodal Language Model image Link ProjectGitHub stars
2023.11 (ICLR 2024) GAIA: a benchmark for General AI Assistants image Link Dataset
2023.10 (ACL 2024) OceanGPT: A Large Language Model for Ocean Science Tasks image Link Project
2023.08 (COLING 2024) LatEval: An Interactive LLMs Evaluation Benchmark with Incomplete Information from Lateral Thinking Puzzles image Link DatasetGitHub stars
2023.08 BOLAA: Benchmarking and Orchestrating LLM-augmented Autonomous Agents image Link DatasetGitHub stars
2023.07 MegaWika: Millions of reports and their sources across 50 diverse languages image Link
2022.09 (NeurIPS 2022) Learn to Explain: Multimodal Reasoning via Thought Chains for Science Question Answering image Link Dataset

Rethinking

Date Paper Link Keywords
2025.03 Unlocking the Potential of AI Researchers in Scientific Discovery: What Is Missing? Link AI researchers, scientific discovery, AI4Science, Diffusion of Innovation, integration of AI expertise
2025.03 Position: AI agents should be regulated based on autonomous action sequences Link AI agents, regulation, autonomous action sequences, existential risks, inference-time computation
2025.02 Performance Evaluation of Large Language Models in Statistical Programming Link Large Language Models, Statistical Programming, SAS Programming, Performance Evaluation, Automatic Code Generation
2025.02 Superintelligent Agents Pose Catastrophic Risks: Can Scientist AI Offer a Safer Path? Link AI safety, generalist AI agents, Scientist AI, non-agentic AI, precautionary principle
2025.02 Evaluating Sakana's AI Scientist for Autonomous Research: Wishful Thinking or an Emerging Reality Towards 'Artificial Research Intelligence' (ARI)? Link Artificial Research Intelligence (ARI), AI Scientist, autonomous research, Sakana, research automation
2025.01 "It makes you think": Provocations Help Restore Critical Thinking to AI-Assisted Knowledge Work Link Generative AI, Critical Thinking, Knowledge Work, Provocations, Metacognitive Thinking
2025.01 Experience with GitHub Copilot for Developer Productivity at Zoominfo Link GitHub Copilot, Developer Productivity, Zoominfo, AI-assisted software development, Enterprise deployment
2025.01 Towards Decoding Developer Cognition in the Age of AI Assistants Link AI assistants, developer productivity, cognitive load, programming tools, expertise levels
2024.12 Hints Help Finding and Fixing Bugs Differently in Python and Text-based Program Representations Link AI programming assistants, bug fixing, hints, program representations, user understanding
2024.12 The impact of AI on engineering design procedures for dynamical systems Link Artificial Intelligence, Engineering Design, Dynamical Systems, Mechatronic Systems, V-model Design Process
2024.11 Probing the limitations of multimodal language models for chemistry and materials research Link Artificial Intelligence, Multimodal Language Models, Chemistry, Materials Science, Benchmark Evaluation
2024.11 AI-Empowered Human Research Integrating Brain Science and Social Sciences Insights Link Artificial Intelligence, Human Research, Brain Science, Social Sciences, Human-AI Joint Research
2024.11 Disrupting Test Development with AI Assistants Link AI Assistants, Test Development, Software Development, Test Pyramid, Automated Testing
2024.10 Need Help? Designing Proactive AI Assistants for Programming Link Proactive AI Assistants, Programming, Large Language Models, Mixed-Initiative Interaction, User Experience
2024.10 (EMNLP 2024) How Does the Disclosure of AI Assistance Affect the Perceptions of Writing? Link AI assistance, writing perceptions, disclosure, quality evaluations, human-AI co-creation
2024.10 The why, what, and how of AI-based coding in scientific research Link AI-based coding, scientific research, large language models, coding assistance, workflow strategies
2024.09 Mining Causality: AI-Assisted Search for Instrumental Variables Link Instrumental Variables, Causal Inference, Large Language Models, Counterfactual Reasoning, Regression Discontinuity Design
2024.09 Towards Ethical Personal AI Applications: Practical Considerations for AI Assistants with Long-Term Memory Link Long-Term Memory, Personal AI Assistants, Ethical Considerations, Large Language Models, Deployment Implications
2024.09 Emerging Reliance Behaviors in Human-AI Text Generation: Hallucinations, Data Quality Assessment, and Cognitive Forcing Functions Link Human-AI collaborative text generation, hallucinations, cognitive forcing functions, data quality assessment, Large Language Models (LLMs)
2024.08 Generative AI Tools in Academic Research: Applications and Implications for Qualitative and Quantitative Research Methodologies Link Generative Artificial Intelligence, academic research, qualitative research, quantitative research, ethical implications
2024.07 Exploring the Evidence-Based Beliefs and Behaviors of LLM-Based Programming Assistants Link Artificial Intelligence, Large Language Models, Software Engineering, Evidence-Based Practices, Programming Assistants
2024.07 The Great AI Witch Hunt: Reviewers Perception and (Mis)Conception of Generative AI in Research Writing Link Generative AI, peer reviewers, research writing, AI-augmented manuscripts, impartial evaluations
2024.07 Large Language Models as Misleading Assistants in Conversation Link Large Language Models, Misleading Assistants, Conversation, Deception, Reading Comprehension Task
2024.06 (EMNLP 2024) Boosting Scientific Concepts Understanding: Can Analogy from Teacher Models Empower Student Models? Link Analogy, Teacher Models, Student Models, Scientific Concepts Understanding, Analogical Reasoning
2024.06 Explain the Black Box for the Sake of Science: the Scientific Method in the Era of Generative Artificial Intelligence Link Scientific Method, Generative Artificial Intelligence, Explainable AI, Scientific Discovery, Interpretability-guided Explanations (IGEs)
2024.06 (Inf. Softw.2025) Using AI-Based Coding Assistants in Practice: State of Affairs, Perceptions, and Ways Forward Link AI assistants, software development, usage patterns, developer perceptions, future improvements
2024.05 Using ChatGPT for Thematic Analysis Link AI-driven tools, qualitative thematic analysis, GPT model, research efficiency, ethical concerns
2024.05 What Can Natural Language Processing Do for Peer Review? Link Natural Language Processing, Peer Review, Scientific Articles, Quality Control, Large Language Models
2024.05 Transforming Software Development with Generative AI: Empirical Insights on Collaboration and Workflow Link Generative AI, software development, collaboration, workflow, ChatGPT
2024.05 From Complexity to Clarity: How AI Enhances Perceptions of Scientists and the Public's Understanding of Science Link AI, science communication, public understanding, linguistic simplicity, scientific dissemination
2024.04 Augmenting the Author: Exploring the Potential of AI Collaboration in Academic Writing Link Generative AI, Academic Writing, Prompt Design, Human-Computer Interaction, AI Collaboration
2024.04 How far are AI-powered programming assistants from meeting developers' needs? Link AI-powered programming assistants, software development tasks, code quality, productivity, user experience
2024.04 Deceptive Patterns of Intelligent and Interactive Writing Assistants Link Large Language Models, Intelligent Writing Assistants, Deceptive Design Patterns, Chatbot-like UI, Interaction Design Impact
2024.03 (ICSE 2024) Envisioning the Next-Generation AI Coding Assistants: Insights & Proposals Link AI coding assistants, in-IDE, AI for Software Engineering, backend designs, app data collection
2024.03 "It is there, and you need it, so why do you not use it?" Achieving better adoption of AI systems by domain experts, in the case study of natural science research Link Artificial Intelligence, adoption, domain experts, natural science research, human-AI collaboration
2024.01 (ICML 2024)πŸ”₯ Can AI Assistants Know What They Don't Know? Link AI Assistants, Large Language Models (LLMs), Open-domain Question Answering, Factual Errors, "I don't know" (Idk) dataset
2023.12 Exploring the intersection of Generative AI and Software Development Link Generative AI, Software Engineering, Zero-shot prompting, Multimodal chain-of-thought, Vector embeddings
2023.12 Generative AI in Writing Research Papers: A New Type of Algorithmic Bias and Uncertainty in Scholarly Work Link Generative AI, Algorithmic Bias, Uncertainty, Scholarly Work, Research Manuscripts
2023.12 Drivers and Barriers of AI Adoption and Use in Scientific Research Link Artificial Intelligence, Adoption, Scientific Research, Human Capital, Barriers and Drivers
2023.11 (EMNLP 2023) Unraveling Downstream Gender Bias from Large Language Models: A Study on AI Educational Writing Assistance Link Large Language Models, Gender Bias, AI Writing Support, Educational Writing, Bias Transfer
2023.10 Conversational Challenges in AI-Powered Data Science: Obstacles, Needs, and Design Opportunities Link Large Language Models, data science, conversational challenges, design recommendations, AI-powered chatbots
2023.10 AI for Mathematics: A Cognitive Science Perspective Link Artificial Intelligence, Mathematics, Cognitive Science, Large Language Models, Mathematical Systems
2023.07 AI empowering research: 10 ways how science can benefit from AI Link Artificial Intelligence, Scientific Research, Data Analysis, Human-AI Collaboration, Creativity in Science
2023.07 The Future of Fundamental Science Led by Generative Closed-Loop Artificial Intelligence Link Artificial Intelligence, Generative AI, Large Language Models, Scientific Discovery, Fundamental Science
2023.07 What Should Data Science Education Do with Large Language Models? Link Large Language Models, Data Science Education, ChatGPT, AI-guided Programming, Pedagogy Evolution
2023.06 The Future of AI-Assisted Writing Link Artificial Intelligence, Natural Language Generation, AI-Assisted Writing, Information Retrieval, User Study
2023.05 Science in the Era of ChatGPT, Large Language Models and Generative AI: Challenges for Research Ethics and How to Respond Link Artificial Intelligence, Research Ethics, ChatGPT, Generative AI, Scientific Integrity
2023.05 Automated Scientific Discovery: From Equation Discovery to Autonomous Discovery Systems Link Automated Scientific Discovery, Equation Discovery, Autonomous Discovery Systems, Deep Neural Networks, Nobel Turing Grand Challenge
2023.03 (Nature 2023)πŸ”₯ ChatGPT and large language models in academia: opportunities and challenges Link LLMs, Academic Writing, Ethical Implications, Bias and Accuracy
2023.03 (ICSE 2024)πŸ”₯ A Large-Scale Survey on the Usability of AI Programming Assistants: Successes and Challenges Link AI Programming Assistants, Usability, Developers, Software Engineering, Cognitive Effort
2023.03 (SEKE 2023)πŸ”₯ Practices and Challenges of Using GitHub Copilot: An Empirical Study Link GitHub Copilot, AI Pair Programmer, programming languages, IDEs, challenges
2023.02 (Sage 2023)πŸ”₯ The Challenges and Opportunities of AI-Assisted Writing: Developing AI Literacy for the AI Age Link Generative AI, Business Communication, AI Literacy, Critical Thinking, AI-Assisted Writing
2023.01 (CHIIR 2023) How Data Scientists Review the Scholarly Literature Link Data Scientists, Scholarly Literature, Literature Review Practices, Information Overload, Interdisciplinary Field
2021.11 (Inf. Fusion 2023) Automated scholarly paper review: Concepts, technologies, and challenges Link Automated scholarly paper review, Artificial intelligence, Peer review, Research evaluation, Academic publishing
2021.03 Toward Building Science Discovery Machines Link Scientific Discovery, Machine Learning, AI Systems, Problem-Solving, Principles of Science Discovery
2021.01πŸ”₯ How Much Automation Does a Data Scientist Want? Link Data Science, Machine Learning, Automation, User-Centered, AutoML Framework

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This repo collects research papers that use AI tools and are in the field of scientific research (including computer science, agronomy, chemistry, physics, etc.). We call this method as Deep-Research.

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