R package for the analysis of massive SNP arrays.
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Updated
Jul 4, 2025 - R
R package for the analysis of massive SNP arrays.
The Polygenic Score Catalog Calculator is a nextflow pipeline for polygenic score calculation
Software program for generating synthetic datasets for genotypes and phenotypes
A toolkit to calculate polygenic scores using PLINK2, PRS-CS, RapidoPGS, or PRSice2.
quincunx: an R package to query, download and wrangle PGS Catalog data
An open database of polygenic scores and relevant metadata needed to apply and evaluate them correctly.
Multi Kernel Linear Mixed Models for Complex Phenotype Prediction
Python applications and libraries for working with PGS data and the PGS Catalog
Statistical Human Genetics course using R
quincunx: an R package to query, download and wrangle PGS Catalog data
Automatized Polygenic Score Prediction
(superseded by pygscatalog) Utilities for working with PGS Catalog API and scoring files
multiPGS_py is a fast, simple and low-memory python method to calculate polygenic scores (PGS/PRS)
RStudio and MPlus scripts to reproduce the analyses in Davidson et al., (2025)
Polygenic Risk Scores (PRS) pipeline.
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