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@Gregor-Mendel-Institute

GMI: Gregor Mendel Institute of Molecular Plant Biology GmbH

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  1. SNPmatch Public

    A simple python library to identify the most likely strain from the population

    Python 9 5

Repositories

Showing 10 of 66 repositories
  • bookend Public

    End-guided RNA assembler

    Python 15 MIT 1 2 0 Updated Apr 8, 2025
  • TRG-ImageProcessing Public

    Swarts Lab CNN stuff

    Python 12 MIT 5 2 1 Updated Feb 20, 2025
  • PROalign Public

    Modified from https://github.com/JAJ256/PROseq_alignment.sh

    Shell 0 MIT 0 0 0 Updated May 21, 2024
  • nf-haplocaller Public Forked from rbpisupati/nf-haplocaller

    Nextflow pipeline for GATK best practices (HaplotypeCaller)

    Nextflow 0 MIT 2 1 0 Updated Mar 8, 2024
  • GWA-Portal Public

    Web-app to store an display GWAS studies

    Java 5 5 61 7 Updated Feb 29, 2024
  • nanoPARE Public

    RNA 5' analysis tools for use with the nanoPARE protocol

    Python 1 GPL-3.0 2 4 0 Updated Feb 8, 2024
  • SNPmatch Public

    A simple python library to identify the most likely strain from the population

    Python 9 MIT 5 2 0 Updated Jan 11, 2024
  • gwas_workshop Public Forked from picla/GWAS_workshop_CK

    basic GWAS workshop in jupyter notebook form

    Jupyter Notebook 0 GPL-3.0 3 0 0 Updated Oct 2, 2023
  • jamge_states_2023 Public

    Code and data for figures in elife paper

    R 0 0 0 0 Updated May 9, 2023
  • gwaR Public

    A collection of R functions to conduct downstream GWAS analysis for arabidopsis thaliana.

    R 5 MIT 1 0 0 Updated Jan 30, 2023
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