Community-curated topic and collection pages on GitHub

A versatile, fully open-source pipeline to extract phenotypic measurements from plant images

python module to plot beautiful and highly customizable genome browser tracks

Labroides dimidiatus (Bluestreak cleaner wrasse)

We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a necessary complement to the study of genomic synteny and str…

my 3D genome pipeline and scripts repository

tools for working with genome variation graphs

A list of interesting genome browser or genome-browser-like implementations

Bioinformatics code libraries and scripts

Python资源大全中文版，包括：Web框架、网络爬虫、模板引擎、数据库、数据可视化、图片处理等，由「开源前哨」和「Python开发者」微信公号团队维护更新。

DNA序列比对结果 可视化展示工具

Identification of transposable element insertion polymorphisms (TIPs) based on a pan-genome and large-scale resequencing data

Phase and visualize subgenomes of an allopolyploid or hybrid based on the repetitive kmers.

Useful bioinformatic scripts

PacBio Secondary Analysis Tools on Bioconda

General analysis of HiC data, including compartment A/B, domains and loops.

Phylogenetic Analysis of Long Terminal Repeat Retrotransposons

scripts and intermediate files used to annotate TEs in Jiao et al.

calling SVs from Blasr contig level alignments