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@bcgsc

BC Cancer Canada's Michael Smith Genome Sciences Centre

Sequencing Centre for Genomics and Bioinformatics Research

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  1. RNA-Bloom RNA-Bloom Public

    🌺 reference-free transcriptome assembly for short and long reads

    Java 108 9

  2. LongStitch LongStitch Public

    🪡Correct and scaffold assemblies using long reads

    Makefile 55 7

  3. ntRoot ntRoot Public

    🌳 Human ancestry inference from genomic data

    Python 7

  4. btllib btllib Public

    📚Bioinformatics Technology Lab common code library

    C++ 26 6

  5. ntEdit ntEdit Public

    ✏️ Genome assembly polishing & SNV detection

    C++ 69 9

  6. goldrush goldrush Public

    Linear-time de novo Long Read Assembler

    C++ 42 2

Repositories

Showing 10 of 120 repositories
  • pori_ipr_client Public

    Integrated Pipeline Reports (IPR) client. The web interface for the reporting application as part of PORI

    bcgsc/pori_ipr_client’s past year of commit activity
    TypeScript 8 GPL-3.0 1 0 2 Updated Jul 11, 2025
  • pori_ipr_api Public

    Integrated Pipeline Reports (IPR) API, the reporting API as part of the PORI platform

    bcgsc/pori_ipr_api’s past year of commit activity
    JavaScript 8 0 0 1 Updated Jul 10, 2025
  • triAMPh Public

    TaRget Identification of AntiMicrobial Peptides with Heterogeneous graph attention networks

    bcgsc/triAMPh’s past year of commit activity
    Python 1 MIT 0 0 0 Updated Jul 9, 2025
  • btl Public

    🔬 Bioinformatics Technology Lab, Genome Sciences Centre

    bcgsc/btl’s past year of commit activity
    HTML 2 3 4 0 Updated Jul 9, 2025
  • unikseq Public

    🧬 Unique (& conserved) DNA sequence identification

    bcgsc/unikseq’s past year of commit activity
    Perl 12 GPL-3.0 1 0 0 Updated Jul 7, 2025
  • pori_graphkb_api Public

    REST API for the GraphKB project

    bcgsc/pori_graphkb_api’s past year of commit activity
    JavaScript 4 GPL-3.0 1 6 1 Updated Jul 3, 2025
  • AMPSeek Public

    Anti-microbial property, protein structure and toxicity detection from peptide sequences

    bcgsc/AMPSeek’s past year of commit activity
    Python 0 0 0 0 Updated Jun 29, 2025
  • ntEdit Public

    ✏️ Genome assembly polishing & SNV detection

    bcgsc/ntEdit’s past year of commit activity
    C++ 69 GPL-3.0 9 0 0 Updated Jun 28, 2025
  • pori_python Public
    bcgsc/pori_python’s past year of commit activity
    Python 0 GPL-3.0 2 2 5 Updated Jun 25, 2025
  • RICO Public
    bcgsc/RICO’s past year of commit activity
    R 0 0 0 0 Updated Jun 25, 2025
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