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  • Georgia Institute of Technology
  • Atlanta, GA, USA

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BWK awk modified for biological data

C 624 119 Updated Aug 11, 2022

RetroSeq is a bioinformatics tool that searches for mobile element insertions from aligned reads in a BAM file and a library of reference transposable elements.

Perl 2 Updated Dec 5, 2011
8 2 Updated Jan 18, 2018

Mosquito TE Annotation

Perl 8 3 Updated Nov 14, 2011

A program for quickly researching genes and other genomic features near disease-associated regions of the genome (from GWAS or sequencing studies.)

Python 3 Updated May 15, 2013

A tool to call somatic single nucleotide variants.

C 41 16 Updated Aug 21, 2015
C++ 3 3 Updated Aug 21, 2011

a tool for processing .bed and .vcf files

C++ 21 11 Updated Apr 25, 2017

Composite of Dygrap for GWAS and GeneViewer for Genes

Java 2 Updated Oct 13, 2020

Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)

C 1,628 563 Updated Mar 22, 2025

RetroSeq is a bioinformatics tool that searches for mobile element insertions from aligned reads in a BAM file and a library of reference transposable elements. Please read the wiki page (link belo…

Perl 67 26 Updated Nov 22, 2022

reference-guided aligner for next-generation sequencing technologies

C++ 55 20 Updated Sep 20, 2016

perl modules for genome wide association studies

2 Updated Nov 14, 2016

SV detection from paired end reads mapping

C++ 38 4 Updated Jul 19, 2010
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