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create summary results for each stage of the pipeline

Status: Open.

#42 In mehta-lab/dynamorph;

· bryantChhun opened on Sep 9, 2021

Move instance segmentation module to <code>run_patch</code> CLI

enhancementNew feature or requestNew feature or request

Status: Open.

#38 In mehta-lab/dynamorph;

· smguo opened on Jul 19, 2021

refactor intermediate data formats

enhancementNew feature or requestNew feature or request

Status: Open.

#36 In mehta-lab/dynamorph;

· bryantChhun opened on Jul 9, 2021

create a docs folder with detailed info on each pipeline stage

Status: Open.

#34 In mehta-lab/dynamorph;

· bryantChhun opened on Jul 8, 2021

enhanced parallelization

Status: Open.

#33 In mehta-lab/dynamorph;

· bryantChhun opened on Jun 30, 2021

Use pytorch data loader for training

Status: Open.

#15 In mehta-lab/dynamorph;

· smguo opened on Feb 2, 2021

Metadata for patches

Status: Open.

#13 In mehta-lab/dynamorph;

· smguo opened on Jan 28, 2021

CLI for dimensionality reduction

Status: Open.

#11 In mehta-lab/dynamorph;

· smguo opened on Jan 28, 2021

a demonstration notebook is needed

Status: Open.

#7 In mehta-lab/dynamorph;

· mattersoflight opened on Dec 24, 2020

 ·  

improve training

Input data format

Status: Open.

#6 In mehta-lab/dynamorph;

· smguo opened on Dec 9, 2020

how to use the pipeline

Status: Open.

#1 In mehta-lab/dynamorph;

· bryantChhun opened on Sep 11, 2020