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@mims-harvard

Artificial Intelligence for Medicine and Science @ Harvard

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  1. TDC TDC Public

    Therapeutics Commons (TDC): Multimodal Foundation for Therapeutic Science

    Jupyter Notebook 1.1k 195

  2. PrimeKG PrimeKG Public

    Precision Medicine Knowledge Graph (PrimeKG)

    Jupyter Notebook 575 120

  3. UniTS UniTS Public

    A unified multi-task time series model.

    Python 551 80

  4. PINNACLE PINNACLE Public

    Contextual AI models for single-cell protein biology

    Python 86 22

  5. ProCyon ProCyon Public

    ProCyon: A multimodal foundation model for protein phenotypes

    Python 34 10

  6. TxAgent TxAgent Public

    TxAgent: An AI Agent for Therapeutic Reasoning Across a Universe of Tools

    Python 479 72

Repositories

Showing 10 of 55 repositories
  • MedTok Public

    [ICML'25] MedTok: Multimodal Medical Code Tokenizer

    mims-harvard/MedTok’s past year of commit activity
    Python 10 0 0 0 Updated Jun 29, 2025
  • mims-harvard.github.io Public

    Lab website

    mims-harvard/mims-harvard.github.io’s past year of commit activity
    HTML 1 0 0 0 Updated Jun 28, 2025
  • Phyla Public

    Phyla: Towards a Foundation Model for Phylogenetic Inference

    mims-harvard/Phyla’s past year of commit activity
    Python 15 3 0 0 Updated Jun 26, 2025
  • ClinVec Public

    ClinVec: Unified Embeddings of Clinical Codes Enable Knowledge-Grounded AI in Medicine

    mims-harvard/ClinVec’s past year of commit activity
    Jupyter Notebook 59 MIT 6 1 1 Updated Jun 26, 2025
  • PhylaNeurips Public
    mims-harvard/PhylaNeurips’s past year of commit activity
    Python 3 0 0 0 Updated Jun 24, 2025
  • ToolUniverse Public

    ToolUniverse is a collection of biomedical tools designed for AI agents

    mims-harvard/ToolUniverse’s past year of commit activity
    Python 145 MIT 20 1 1 Updated Jun 7, 2025
  • PDGrapher Public

    Combinatorial prediction of therapeutic perturbations using causally-inspired neural networks

    mims-harvard/PDGrapher’s past year of commit activity
    Jupyter Notebook 26 MIT 6 1 0 Updated May 16, 2025
  • KUL-KT Public
    mims-harvard/KUL-KT’s past year of commit activity
    0 MIT 0 0 0 Updated May 9, 2025
  • COMPASS Public

    Generalizable AI predicts immunotherapy outcomes across cancers and treatments

    mims-harvard/COMPASS’s past year of commit activity
    Jupyter Notebook 36 MIT 6 0 0 Updated May 6, 2025
  • COMPASS-web Public

    Web Companion for Generalizable AI predicts immunotherapy outcomes across cancers and treatments

    mims-harvard/COMPASS-web’s past year of commit activity
    Jupyter Notebook 4 MIT 1 0 0 Updated May 1, 2025
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