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Blobdetector yields incorrect results

bugAn issue with an existing featureAn issue with an existing feature

Status: Open.

#2075 In spacetx/starfish;

· shachafl opened on May 16, 2025

napari tests failing

bugAn issue with an existing featureAn issue with an existing feature

Status: Open.

#2069 In spacetx/starfish;

· iimog opened on May 9, 2025

Using return instead of assert in starfish/core/spots/FindSpots/test/test_spot_detection.py

bugAn issue with an existing featureAn issue with an existing feature

Status: Open.

#2067 In spacetx/starfish;

· shachafl opened on May 6, 2025

Missing test coverage for some scripts published on Starfish ReadTheDocs

Status: Open.

#2065 In spacetx/starfish;

· shachafl opened on Apr 16, 2025

DeprecationWarning: <code>magic(...)</code> is deprecated since IPython 0.13 (warning added in 8.1)

bugAn issue with an existing featureAn issue with an existing feature

low priority

Status: Open.

#2060 In spacetx/starfish;

· shachafl opened on Mar 24, 2025

Dropping support for Python 3.9 due to critical vulnerability with a dependency

dependenciesPull requests that update a dependency filePull requests that update a dependency file

docsdocumentation improvementsdocumentation improvements

pythonPull requests that update Python codePull requests that update Python code

Status: Open.

#2056 In spacetx/starfish;

· shachafl opened on Mar 21, 2025

 ·  

Drop support for Python 3.9

Using fork() in a multi-threaded environment can cause deadlocks

bugAn issue with an existing featureAn issue with an existing feature

Status: Open.

#2055 In spacetx/starfish;

· shachafl opened on Mar 21, 2025

xarray versions 2023.9+ introduce new errors in testing

bugAn issue with an existing featureAn issue with an existing feature

dependenciesPull requests that update a dependency filePull requests that update a dependency file

Status: Open.

#2031 In spacetx/starfish;

· shachafl opened on Nov 13, 2024

Upgrading jsonschema to 4.18+ to resolve security issues with older dependencies breaks starfish

bugAn issue with an existing featureAn issue with an existing feature

dependenciesPull requests that update a dependency filePull requests that update a dependency file

Status: Open.

#2020 In spacetx/starfish;

· shachafl opened on Sep 15, 2024

barcodeBuildFunc modifies external variables

bugAn issue with an existing featureAn issue with an existing feature

Status: Open.

#2007 In spacetx/starfish;

· guoyang-github opened on Nov 16, 2023

Possible parameter inversion in LearnTransform.Translation class

bugAn issue with an existing featureAn issue with an existing feature

Status: Open.

#2005 In spacetx/starfish;

· guoyang-github opened on Nov 15, 2023

Link to raw data is not working

bugAn issue with an existing featureAn issue with an existing feature

Status: Open.

#1937 In spacetx/starfish;

· mstemmer opened on Mar 10, 2021