Skip to content
View joshmoore's full-sized avatar

Block or report joshmoore

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Please don't include any personal information such as legal names or email addresses. Maximum 100 characters, markdown supported. This note will be visible to only you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
Stars

Zarr

68 repositories
JavaScript 5 Updated Aug 11, 2023

Recompress zarr chunks in-place

Python 9 Updated Feb 23, 2023
Python 19 6 Updated Sep 28, 2024

ImSwitch is a software solution in Python that aims at generalizing microscope control by providing a solution for flexible control of multiple microscope modalities.

Python 77 55 Updated Jun 3, 2025

An experimental cache for Zarr chunks

Jupyter Notebook 2 Updated Sep 17, 2020

Rust implementation of the Zarr N-dimensional array format.

Rust 54 5 Updated Feb 27, 2024

Prototype implementation of zarr v3 in rust

Rust 18 Updated Nov 20, 2023

Convert nd2 to zarr

Python 1 Updated May 14, 2025

The Pandata scalable open-source analysis stack

68 1 Updated Jun 6, 2024

An experimental asdf extension to support chunked arrays.

Jupyter Notebook 3 2 Updated Jun 30, 2025

Python library allowing to manipulate data split into a collection of groups stored in Zarr format.

Python 13 3 Updated Jun 18, 2025

A Rust library for the Zarr storage format for multidimensional arrays and metadata

Rust 152 21 Updated Jul 1, 2025

Demonstrate a HDF5 Zarr Shard Proof of Concept

Python 3 Updated Jul 11, 2023

An implementation of chunked, compressed, N-dimensional arrays for Python.

Python 1,732 336 Updated Jul 4, 2025

A dataset for loading zarr files to be used in machine learning training pipelines

Python 33 4 Updated May 28, 2025

Read & decompress many chunks of files at high speed

Rust 64 1 Updated May 5, 2025

Various tools for creating and manipulating Zarr V3 data with the zarrs Rust crate

Rust 23 3 Updated Jul 5, 2025
Python 3 Updated Feb 8, 2024

A Python interface to access neuroanatomical atlases

Python 154 47 Updated Jul 4, 2025

Cloud-Optimize your Scientific Data as Virtual Zarr stores, using xarray syntax.

Python 207 43 Updated Jul 6, 2025

SCARR is a Side-Channel Analysis (SCA) framework

Python 71 15 Updated Jun 17, 2025

Slides, notebooks, data and other useful material for the talks.

Jupyter Notebook 1 Updated May 6, 2025

🎀 Awesome Zarr resources

91 1 Updated Jun 14, 2024
Jupyter Notebook 14 7 Updated Apr 23, 2025

A draft specification for the nifti-zarr format

15 2 Updated Apr 8, 2025

Browsing multiple Zarr archives within a file system

Python 19 Updated May 16, 2024

Manuscript and associated scripts for vcf-zarr publication

Jupyter Notebook 3 11 Updated Apr 1, 2025

Type annotations for specifying, validating, and serializing arrays with arbitrary backends in Pydantic (and beyond)

Python 112 1 Updated May 10, 2025

JAR files for the c-blosc native library.

2 1 Updated Jul 2, 2025