Merge branch 'master' of https://github.com/timeu/gwas-lecture

pull

Author: mahort

Lecture-0-Setup-of-Python-Environment.ipynb

@@ -43,19 +43,27 @@
     "## Create a conda environment and install limix, jupyter notebook\n",
     "\n",
     "```bash\n",
-    "$ conda create -n gwas python=2.7 anaconda\n",
-    "$ source activate gwas\n",
-    "$ conda install -c conda-forge limix\n",
-    "$ conda install jupyter\n",
+    "$ git clone https://github.com/timeu/gwas-lecture.git \n",
+    "$ # or download archive from and extract it from https://github.com/timeu/gwas-lecture/archive/master.zip\n",
+    "$ cd gwas-lecture\n",
+    "$ conda env create -f environment.yml\n",
     "```\n",
     "\n",
     "## Start jupyter notebook\n",
     "\n",
     "```\n",
+    "$ source activate gwas-lecture\n",
     "$ jupyter notebook\n",
     "```\n",
     "Open link that is displayed in terminal in browser \n"
    ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": []
   }
  ],
  "metadata": {