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@MontpellierRessourcesImagerie

Montpellier Ressources Imagerie

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  1. imagej_macros_and_scripts imagej_macros_and_scripts Public

    ImageJ macros and scripts written at the imaging facility MRI

    Jupyter Notebook 33 16

  2. MetroloJ_QC MetroloJ_QC Public

    Java 13 1

  3. mri-workshop-machine-learning mri-workshop-machine-learning Public

    The MRI machine learning workshop

    Jupyter Notebook 3 1

  4. image-analysis-notebooks image-analysis-notebooks Public

    Jupyter Notebook 3

  5. napari-bigfish napari-bigfish Public

    A napari-plugin providing an alternative GUI for Big-FISH. Big-FISH is a python package for the analysis of smFISH images

    Python 3 1

  6. napari-J napari-J Public

    Connect Napari with FIJI/ImageJ

    Python 2 2

Repositories

Showing 10 of 75 repositories
  • tree-ring-analyzer Public Forked from MontpellierRessourcesImagerie/microglia-analyzer

    Segment tree rings and analyze them.

    Jupyter Notebook 0 MIT 1 0 0 Updated Mar 12, 2025
  • MRI-CIA Public

    Overview of the tools, scripts and workshops created by the image analysis service of the Montpellier Ressources Imagerie imaging facility.

    0 MIT 0 0 0 Updated Mar 12, 2025
  • presentations Public
    HTML 0 0 0 0 Updated Mar 7, 2025
  • imagej_macros_and_scripts Public

    ImageJ macros and scripts written at the imaging facility MRI

    Jupyter Notebook 33 MIT 16 3 0 Updated Mar 7, 2025
  • open-desks-app Public

    Booking application used by MRI-CIA for the open-desk sessions.

    PHP 0 0 0 0 Updated Mar 6, 2025
  • napari-tree-rings Public

    A napari plugin to delineate bark, pith, and xylem annual rings and to measure their area and thickness on circular sections of a tree trunk.

    Python 0 MIT 0 0 0 Updated Mar 4, 2025
  • Python 0 GPL-3.0 2 0 0 Updated Feb 14, 2025
  • microglia-analyzer Public

    A Napari plugin meant to detect and segment microglia before extracting some measures about them.

    Python 2 MIT 1 0 0 Updated Feb 13, 2025
  • UNETR_2D_Tree_Rings Public Forked from AAitorG/UNETR_2D

    2D UNETR implementation in Tensorflow-keras, for the segmentation of annual tree rings.

    Jupyter Notebook 0 MIT 2 0 0 Updated Feb 10, 2025
  • Python 0 MIT 0 0 0 Updated Feb 10, 2025

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