feat(step-generation): plate reader python commands

[jerader]

closes AUTH-1512

Overview

this PR creates the python commands for the 4 plate reader commands: open lid, close lid, initialize, and read. For reading, the output is a CSV file and not imbedded in the python protocol, since PD only supports outputting into a CSV file right now.

Test Plan and Hands on Testing

Review the unit tests and smoke test!

Changelog

• add python command for the 4 plate reader commands
• add unit test coverage

Risk assessment

low, behind ff

[codecov]

Codecov Report

Attention: Patch coverage is 95.23810% with 1 line in your changes missing coverage. Please review.

Project coverage is 25.69%. Comparing base (8a9bb57) to head (b335d29).
Report is 2 commits behind head on edge.

Files with missing lines	Patch %	Lines
...mmandCreators/atomic/absorbanceReaderInitialize.ts	88.88%	1 Missing ⚠️

Additional details and impacted files

@@           Coverage Diff           @@
##             edge   #17646   +/-   ##
=======================================
  Coverage   25.69%   25.69%           
=======================================
  Files        2850     2851    +1     
  Lines      219383   219475   +92     
  Branches    17970    17975    +5     
=======================================
+ Hits        56363    56392   +29     
- Misses     163005   163068   +63     
  Partials       15       15           

Flag	Coverage Δ
protocol-designer	18.94% <4.76%> (-0.01%)	⬇️
step-generation	4.39% <95.23%> (+0.01%)	⬆️

Flags with carried forward coverage won't be shown. Click here to find out more.

Files with missing lines	Coverage Δ
...commandCreators/atomic/absorbanceReaderCloseLid.ts	100.00% <100.00%> (ø)
.../commandCreators/atomic/absorbanceReaderOpenLid.ts	100.00% <100.00%> (ø)
...src/commandCreators/atomic/absorbanceReaderRead.ts	80.55% <100.00%> (+2.43%)	⬆️
...mmandCreators/atomic/absorbanceReaderInitialize.ts	96.29% <88.88%> (-3.71%)	⬇️

... and 2 files with indirect coverage changes