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  • FDA_Pesticide_Glossary Public

    Chemical mining of pesticide glossary released by the FDA

    HTML 1 1 MIT License Updated Feb 22, 2021

  • unLATCA Public

    R MIT License Updated Feb 9, 2021

  • public.conflabs.com Public

    Web scrape archive and data clean of public.conflabs.com

    MIT License Updated Jan 23, 2021

  • UCR Public

    University of California Dissertation

    TeX Updated Jan 4, 2021

  • ThePesticideFiles Public

    Corpus of bound books on "Pesticides"

    2 MIT License Updated May 28, 2018

  • chembrain Public

    Learn chemistry through tactile play. Build intuition for molecules and chemistry by drawing and playing interactive d3.js visualizations in your browser.

    JavaScript 1 1 Updated May 19, 2015

  • TesseractOCR Public

    Full text extraction using the Open Source Tesseract OCR software https://code.google.com/p/tesseract-ocr/ and imagemagick

    Shell 12 3 MIT License Updated May 16, 2015

  • LifeChemicalsAnnotation Public

    Annotation of the Life Chemical stock compound library using several cheminformatic and full text mining approaches

    MIT License Updated May 12, 2015

  • andrewdefries.github.io Public

    github.io

    HTML MIT License Updated May 1, 2015

  • ChemicalEyes Public

    Chemical Vision for non-chemists

    Shell MIT License Updated Apr 29, 2015

  • CA_Pesticides_1991_2011 Public

    A means to show the Chemical space of pesticides reported used in CA from 1991-2011

    HTML 1 MIT License Updated Apr 29, 2015

  • hwriter4ChemmineR Public

    hwriter tools to print tables from ChemmineR

    HTML MIT License Updated Mar 24, 2015

  • query_wet_news Public

    Looking through the common crawl archives news entries

    Shell 1 1 MIT License Updated Jan 2, 2015

  • PubChemMapReduce Public

    Clustering of PubChem to DrugBank in a Map Reduce process

    R 1 1 MIT License Updated Nov 15, 2014

  • ReadABigBook Public

    Text processing tricks to read selections of the PubMed Central Open Corpus

    Shell MIT License Updated Oct 29, 2014

  • ToxCast Public

    Repo documenting presentation at ToxCast Data Summit

    R MIT License Updated Sep 17, 2014

  • PubChem2InChI Public

    Extracting minimal fields from the Pubchem dataset using sdfstream function of ChemmineR

    R MIT License Updated Jul 20, 2014

  • common_crawl_wet2_chernoff_world Public

    R 1 Updated Jun 12, 2014

  • PubChemFingerPrints Public

    PubChem fingerprint files for fast searching using simsearch of openbabel

    Shell 1 1 MIT License Updated May 29, 2014

  • T3DB Public

    Toxin, Toxin-Target Database

    R 1 GNU General Public License v2.0 Updated May 20, 2014

  • fmcsR-the-SDFset Public

    Using fmcsR and ChemmineR to group cluster compounds based on Atom Pair similarity and make standard MCS reports of each compound cluster

    R MIT License Updated May 19, 2014

  • PubChemROF Public

    PubChem Rule of Five Chemical Space Analysis

    R GNU General Public License v2.0 Updated May 16, 2014

  • DrugBank Public

    Work with Databases from DrugBank.ca

    R 1 MIT License Updated May 15, 2014

  • CorpusReaders Public

    Help for speed readers

    R Updated May 12, 2014

  • SDF2PDF Public

    Scripts to convert SDFset object into PDF using open babel, mol2chemfig and Latex

    TeX MIT License Updated May 10, 2014

  • RCircos4ChemmineR Public

    Mapping nearest neighbor relationships of compounds onto a circos graph

    MIT License Updated Apr 27, 2014

  • YAWYE Public

    You Are What You Eat

    R Updated Apr 27, 2014

  • ClickableActives Public

    Bioactives from the Clickable Collection of Terminal Acetylene Small Molecules tested in Arabidopsis and Saccharomyces

    R MIT License Updated Apr 17, 2014

  • ZincOverFlow Public

    Cheminformatics exploration of ZincAcetylene.sdf compared to Merged.sdf

    R Updated Mar 29, 2014

  • Ames_ToxBenchmark Public

    Dataset for training the Ames test from tox_benchmark_N6512_name.sdf

    MIT License Updated Mar 13, 2014