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Software gardening...
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Software gardening...
55 followers · 115 following

Achievements

Achievement: Pair Extraordinairex4Achievement: YOLOAchievement: QuickdrawAchievement: Pull Sharkx3

Achievements

Achievement: Pair Extraordinairex4Achievement: YOLOAchievement: QuickdrawAchievement: Pull Sharkx3

Organizations

@conda-forge @cytomining @sphinx-contrib @nf-core @University-of-Colorado-Anschutz-Denver @UCBoulder @CU-DBMI @WayScience @software-gardening

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d33bs/README.md

Hi, I'm Dave 👋

I'm a developer with a passion for software design, collaboration and innovation. Some of my interests include research data engineering, in-memory data flow, and scientific software.

I've been on Github for 12 years. During that time I've contributed to 99 repositories, opened 648 issues, performed 619 code reviews, and have opened 783 pull requests.

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  1. cytomining/CytoTable cytomining/CytoTable Public

    Transform CellProfiler and DeepProfiler data for processing image-based profiling readouts with Pycytominer and other Cytomining tools.

    Python 14 6

  2. cytomining/pycytominer cytomining/pycytominer Public

    Python package for processing image-based profiling data

    Python 118 39

  3. cytomining/coSMicQC cytomining/coSMicQC Public

    Single cell Morphology Quality Control (coSMicQC)

    Python 8 3

  4. software-gardening/almanack software-gardening/almanack Public

    An open-source handbook of applied guidance and tools for sustainable software development and maintenance.

    Jupyter Notebook 11 2

  5. cytomining/CytoDataFrame cytomining/CytoDataFrame Public

    An in-memory data analysis format for single-cell profiles alongside their corresponding images and segmentation masks.

    Python 2 2

  6. WayScience/nViz WayScience/nViz Public

    A tool for creating and visualizing n-dimensional microscopy images.

    Python 1 3