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  1. sivirep sivirep Public

    Data Wrangling and Automated Reports from 'SIVIGILA' source

    R 43 4

  2. epiparameter epiparameter Public

    R package with classes and helper functions for working with epidemiological parameters and access to a library of epidemiological parameters for infectious diseases

    R 35 12

  3. serofoi serofoi Public

    Estimates the Force-of-Infection of a given pathogen from population based sero-prevalence studies

    R 18 4

  4. vaccineff vaccineff Public

    R package with tools for estimating vaccine effectiveness and vaccine related metrics

    R 16 4

  5. cfr cfr Public

    R package to estimate disease severity and under-reporting in real-time, accounting for reporting delays in epidemic time-series

    R 13 4

  6. epiCo epiCo Public

    R package for statistical and spatiotemporal modeling of epidemiological data for vector-borne diseases in Colombia

    R 12 2

Repositories

Showing 10 of 61 repositories
  • etdashboard Public

    Developer dashboard for a universe overview of Epiverse-TRACE packages

    R 1 0 0 0 Updated Mar 8, 2025
  • simulist Public

    An R package for simulating line lists

    R 9 1 9 0 Updated Mar 7, 2025
  • .github Public
    1 1 5 0 Updated Mar 7, 2025
  • cleanepi Public

    R package to clean and standardize epidemiological data

    R 9 3 14 5 Updated Mar 7, 2025
  • linelist Public

    R package for handling linelist data

    R 8 4 9 (1 issue needs help) 2 Updated Mar 6, 2025
  • R 3 2 64 (2 issues need help) 0 Updated Mar 6, 2025
  • tutorials Public
    R 3 4 39 (3 issues need help) 1 Updated Mar 6, 2025
  • epiverse-trace.github.io Public

    Technical blog of the Epiverse-TRACE project, where we share opinions and investigations in R package development, or scientific software development more generally

    R 3 3 11 (1 issue needs help) 4 Updated Mar 6, 2025
  • R 2 1 36 0 Updated Mar 5, 2025
  • R 2 3 40 4 Updated Mar 5, 2025

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