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  • snakemake Public

    Forked from snakemake/snakemake

    This is the development home of the workflow management system Snakemake. For general information, see

    HTML MIT License Updated Jan 15, 2025

  • mfinder Public

    A Python script that takes a FASTA file, asks for a motif and then finds it in the sequences

    Python GNU General Public License v3.0 Updated Nov 23, 2024

  • fastonex Public

    Converts a FASTA formatted file into NEXUS and prints it to STDOUT.

    Python GNU General Public License v3.0 Updated Aug 17, 2024

  • microbiome_analysis Public

    All scripts used for the analysis of a microbiome.

    R GNU General Public License v3.0 Updated Jun 29, 2024

  • sarco_trees_scripts Public

    Contains all the scripts used to perform phylogenetic analysis to muscular sarcocystosis in two arctic foxes.

    Python GNU General Public License v3.0 Updated May 19, 2024

  • entrez-retriever Public

    Uses the Entrez API to query the NCBI servers for sequences.

    Python GNU General Public License v3.0 Updated Mar 27, 2024

  • seqconverter Public

    A file converter written in Python that converts FASTA, NEXUS and Phylip format files

    Python GNU General Public License v3.0 Updated Jun 4, 2023

  • pr_bio_2022-2023_assignments Public

    Forked from StuntsPT/pr_bio_2022-2023_assignments

    A repository to host the files used by the students of "Perspetivas em Bioinformática" 2022-2023 class to submit their assignments

    GNU General Public License v3.0 Updated Jan 31, 2023