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The Web framework for perfectionists with deadlines.

Python 82,668 32,360 Updated Mar 11, 2025

Google Drive Python Wrapper: Automate file operations with a temporary access token. Simple, efficient, and ready for your Drive API projects.

Python 3 Updated Oct 25, 2023

An open-source application for biological image analysis

Python 965 390 Updated Mar 5, 2025

Software for writing protocols and running them on the Opentrons Flex and Opentrons OT-2

Python 438 180 Updated Mar 12, 2025

Sequencing analysis pipeline

Nextflow 14 Updated Feb 18, 2025

Python package for interpreting sequencing data of assembled DNA constructs (plasmids)

Python 3 Updated Feb 15, 2025

Repository for PlateEditor, the web application allowing management of plate layout, results visualization and analysis

JavaScript 20 1 Updated Feb 7, 2025

Nanopore Plasmid Sequencing

JavaScript 32 1 Updated Oct 10, 2023

Quality control tools for nanopore sequencing data

Python 102 11 Updated Oct 26, 2024

Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.

Python 32 9 Updated Jun 1, 2022

Plotting scripts for long read sequencing data

Python 461 48 Updated Feb 1, 2025

DEPRECATED - Teselagen's Open Source Vector/Plasmid Editor Component

JavaScript 202 73 Updated Jul 28, 2023

qcat is a Python command-line tool for demultiplexing Oxford Nanopore reads from FASTQ files.

Python 78 16 Updated Dec 15, 2020

Cutadapt removes adapter sequences from sequencing reads

Python 537 133 Updated Feb 17, 2025

A quality control analysis tool for high throughput sequencing data

Java 485 88 Updated Jan 10, 2024

Webserver and command line tool for annotating engineered plasmids

Python 112 24 Updated Mar 6, 2025

Software for running top-level automation control scripts

C# 3 Updated Dec 19, 2024

Python toolbox for phenotype analysis of arrayed microbial colonies

Python 17 3 Updated Feb 9, 2024

is an open-source LIMS (laboratory Information Management System) for Next Generation Sequencing sample management, statistics and reports, and bioinformatics analysis service management.

Python 73 36 Updated Nov 15, 2024

Open source Front-End tool to simulate and visualize a microplate, an assay plate with multiple wells used as small test tubes in biology

TypeScript 4 Updated Mar 24, 2023

General low-level API

Python 49 16 Updated Jul 18, 2022

⚗️ Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies

Python 55 11 Updated Jul 28, 2023

SBOL Enhancement Proposals

Python 11 16 Updated May 5, 2023

The reference implementation of the SBOL Visual standard

HTML 33 16 Updated Mar 20, 2023

A Computational Workflow for Designing Libraries of sgRNAs for CRISPR-Mediated Base Editing, and much more

Python 19 4 Updated May 26, 2024

(Python3, PyQt5) GUI software to tile large images. Designed to image 96-well plates used in wet labs.

Python 12 1 Updated Jun 28, 2018

Django application and library for importing and exporting data with admin integration.

Python 3,150 803 Updated Mar 6, 2025

🌊 Smooth animation library for interpolating numbers

JavaScript 1,806 32 Updated Mar 2, 2025

The Aquarium Lab Operating System

Ruby 61 15 Updated Mar 8, 2025
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