Skip to content
@gustaveroussy

Gustave Roussy

Gustave Roussy

Popular repositories Loading

  1. sopa sopa Public

    Technology-invariant pipeline for spatial omics analysis that scales to millions of cells (Xenium / Visium HD / MERSCOPE / CosMx / PhenoCycler / MACSima / etc)

    Python 172 27

  2. EaCoN EaCoN Public

    Easy Copy Number !

    R 21 14

  3. FG-Lab FG-Lab Public

    R 10 5

  4. CFS CFS Public

    R package using ICA based method for spatial transcriptomics analysis (Visium/Slide-seq/CosMX/MERSCOPE)

    R 7 2

  5. MetaPRISM_Public MetaPRISM_Public Public

    Code support all the analyses and figures for the MetaPRISM paper.

    Python 7 1

  6. single-cell single-cell Public

    R 5 4

Repositories

Showing 10 of 54 repositories
  • sopa Public

    Technology-invariant pipeline for spatial omics analysis that scales to millions of cells (Xenium / Visium HD / MERSCOPE / CosMx / PhenoCycler / MACSima / etc)

    Python 172 BSD-3-Clause 27 23 (1 issue needs help) 3 Updated Mar 11, 2025
  • bigr_rna_editing Public

    This pipeline uses SPRINT and RNAEditingIndexer to identify editing event from RNA-seq

    Python 0 GPL-3.0 0 0 0 Updated Mar 10, 2025
  • PipelineAgentService Public

    PipelineAgentService is a large language model (LLM)-based application designed for the automated management of data processing tasks.

    Python 1 MIT 2 0 0 Updated Mar 5, 2025
  • single-cell Public
    R 5 GPL-3.0 4 0 1 Updated Mar 2, 2025
  • LaurieMengerLab Public
    HTML 0 BSD-3-Clause 0 0 0 Updated Feb 3, 2025
  • FG-Lab Public
    R 10 5 3 0 Updated Jan 29, 2025
  • IFSBM-bigdata Public

    Repository with the contents for the coding exercices and the lectures of module 11 of ISFBM university diploma.

    R 1 3 0 0 Updated Jan 6, 2025
  • Rstuff Public

    A compilation of R scripts for different, widely diverse purposes

    R 1 GPL-3.0 0 0 0 Updated Dec 3, 2024
  • training_bigr Public

    This repository containing all trainings from bioinformatics platform of Gustave Roussy

    HTML 0 0 0 0 Updated Oct 27, 2024
  • CFS Public

    R package using ICA based method for spatial transcriptomics analysis (Visium/Slide-seq/CosMX/MERSCOPE)

    R 7 2 3 0 Updated Oct 23, 2024
View all repositories

People

This organization has no public members. You must be a member to see who’s a part of this organization.

Top languages

Loading…