TODO: Move this to ki-tools or Sage

Synapse challenge utility functions

Programmatic interface to Synapse services for Python

Python package for JSON validation by the Sage Bionetworks DCC group

AWS infrastructure for VEO-IBD consortium data management

Validate data, metadata, and annotations

Proof of Concept -- Do Not Use

The Synapse Repository Services project is the home of the JSON REST web services for Synapse.

JSON validation schemas

A mosaic detecting software based on phasing and random forest

Automation for the Sage AWS org-sagebase-sandbox account

Sage Bionetworks derived standards for annotating content in Synapse.

CWL interface to the Synapse command line.

Score Cell Tracking Results Against Gold Standard NeuroLINCS Data.

From https://github.com/common-workflow-language/workflows

A collection of docker/singularity container build definitions created at UCI U54 Cancer Center for the Cancer Systems Biology Consortium (CSBC) and Physical Sciences in Oncology Network (PS-ON) wo…

Code samples for using Python on Google Cloud Platform

Validate BSMN Grant Data

A Serverless application that runs on AWS Lambda exposing a GraphQL interface for integrating with Synapse

Wellcome Data Re-use Prize: Surveillance

An R package providing programmatic access to Synapse

Basic structure of a R Shiny application for use on Synapse

Collection of Gists

BSMN common data processing pipeline